KEGG   Amphimedon queenslandica (sponge): 100634218
Entry
100634218         CDS       T02284                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
aqu  Amphimedon queenslandica (sponge)
Pathway
aqu03018  RNA degradation
aqu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100634218
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100634218
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aqu03019]
    100634218
   03041 Spliceosome [BR:aqu03041]
    100634218
Messenger RNA biogenesis [BR:aqu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100634218
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     100634218
Spliceosome [BR:aqu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    100634218
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 100634218
NCBI-ProteinID: XP_019852863
Position
Unknown
AA seq 108 aa
MAASAPPDKKRRETLLSAELGKYLDKRIRVKFQGGRETSGILKGYDQLLNLVLDGAIEYL
QDPKDQFKLTDETRSLGLVVCRGTAVVLICPADTMEPIANPFLQQEPS
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcatcggcacctcctgataagaaaaggcgagagaccctcttgagtgcagaacta
ggcaaataccttgacaagagaattagagttaaattccaaggaggaagagaaactagtggc
atattgaaaggctacgatcaactcctcaaccttgtactggatggtgctattgaatacttg
caagacccaaaggatcaatttaagttgacagacgagactcgttctcttggtctcgtggtc
tgccgtggaacagctgtggtgctaatatgtccagcagacactatggagcctattgctaat
ccattcttacaacaagagccatcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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