KEGG   Amphimedon queenslandica (sponge): 100637149
Entry
100637149         CDS       T02284                                 
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
  KO
K12813  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6]
Organism
aqu  Amphimedon queenslandica (sponge)
Pathway
aqu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100637149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aqu03041]
    100637149
Spliceosome [BR:aqu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    100637149
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    100637149
SSDB
Motif
Pfam: OB_NTP_bind HA2_N Helicase_C HA2_C DEAD AAA_22 PWI nSTAND3 AAA_19 Flavi_DEAD AAA_30 SRP54 T2SSE
Other DBs
NCBI-GeneID: 100637149
NCBI-ProteinID: XP_011402843
UniProt: A0A1X7VTM7
Position
Unknown
AA seq 1049 aa
MADVVAWVGDQLYEILGLSDRYTAEFLVGLAKKSSSLDGFVSQLESTGALTIDHKTREFA
SELWARVPHKAVVEKPARAKEREAKLQTQRNKSYQILYDSGDEEEEAIMKKRRSSLSSGK
GIKNSKRNIRKDKSSQWESDSSSSEEEKEMKAKRVRVEEPKEEEEDEWDAMEKEREKDLL
ERDALNERIKKKDKEKTRKIVEKSDKKGYEEARKRLQVAEKDQKKLIPELRKKSRIRYLG
DRAQDKLAELDADIIDNEYLFSDTKLTKREEAEHLRKKKLKELADEHRNAKDMEKIERYH
IPSEKEKPSARYEEPRKEELLGPNADLRKWEDEQLGIALVRFGAKDAKEKNKQKEYDLVM
DDEVAFVLAETVAGSKGENEEEMPEGPSVEERRKMNLEETRRSLPIFPYREPLLEAVENH
QILIIEGETGSGKTTQIPQYLYEAGYCSNKMKIGCTQPRRVAAMSVAARVSAEMGVKLGN
EVGYSIRFEDCTSERTVIKYMTDGMLLREFLGEPDLESYSVMIIDEAHERTLHTDVLFGL
VKDIARFRPDLKLLVSSATMDTKKFSEFFDDAPIFRIPGRRYPVDLYYTKAPEADYLDAA
VVSVLQIHLTQPRGDILVFLTGQEEIETTYEMLKERTAKLGSRIGELVILPIYANLPSDM
QAKIFEPTPPGARKVVLATNIAETSLTIDGIIFVIDPGFCKQKSYNPRTGMESLVVVPCS
KASSNQRAGRAGRVAAGKCFRLFTSWAYHNEMEDTTIPEIQRTNLGNVVLLLKSLGINDL
INFDFMDPPPPETLMLALEQLYALGALNHMGELTKLGRRMAEFPVDPAMSKMLIVSEKYG
CSEEILTITAMLSVNNAIFYRPKDRVVHADTARQSFFRPGGDHLTLLAVYNDWVSTDYST
QWCFDNFIQHRSMKRARDVRDQLEGLMERVEIDLASSEDVVAIRKAITAGYFYHAARLSK
GGYRTAKHQQVVHIHPNSSLFEDQPRWVIYFELVFTSKEYMRQVIEIDNQWLLEVAPHYY
KAKDIQDENRKMPKGAGASRDDTRFDNQF
NT seq 3150 nt   +upstreamnt  +downstreamnt
atggctgacgttgtggcttgggttggagaccaattgtacgaaatcctcggcctctctgac
cgctacacagctgaatttctagtaggacttgcaaagaagtcttcctctttagatggcttt
gttagtcagcttgaaagtactggtgcactgacgatagaccataaaaccagagagtttgct
tcagagctatgggctagagtcccacacaaggcagtggtggagaagccagccagagccaaa
gagagagaggcaaaacttcagacccaaaggaacaaaagctaccagatattgtatgactct
ggcgatgaggaagaggaagccattatgaaaaaaagacgatcgtcactgtcgagtggaaaa
ggaataaagaacagtaaaagaaatatacgaaaagataagagcagtcagtgggagagtgac
agtagtagtagcgaggaggagaaagagatgaaggcaaagagagtaagagtcgaagagccc
aaggaggaggaggaggatgaatgggatgcaatggagaaggagagggagaaggatttgctg
gagagagatgctttgaacgagagaataaagaaaaaggataaagagaagactaggaaaatt
gtcgaaaaatcggataaaaaaggttatgaagaagcaaggaaacgactacaggttgctgaa
aaagaccaaaagaaactgattcctgagttgcgtaaaaagtctcgcatacggtaccttggt
gatcgtgctcaagacaaacttgcagagctggatgctgatatcattgacaatgaatatctg
ttctctgataccaaattgactaagagggaagaagctgagcatctacggaaaaagaaatta
aaggagcttgctgatgagcatagaaatgcaaaggacatggagaagattgaacggtatcat
attccttctgagaaagaaaaaccatcagctaggtatgaagagcctcggaaagaggaattg
ttggggcccaatgcagatttgagaaaatgggaggacgagcagttgggcatagccctggtt
aggttcggtgccaaagatgcaaaagagaaaaacaagcaaaaagagtatgatctagtcatg
gatgatgaggtagcatttgtcttggctgaaactgtagctggcagtaaaggagagaatgaa
gaagaaatgcctgaaggaccaagtgtggaagaaagaagaaagatgaatcttgaagaaact
aggaggagtttgcctatctttccttatcgtgagccattactagaagctgttgaaaatcat
caaatattgattattgaaggtgaaactggctctggaaagaccacacagatacctcaatac
ctttatgaagctggctattgctctaacaagatgaagattggttgcacacagcctcgtaga
gttgctgccatgagtgttgctgctcgtgtctcagctgaaatgggagtgaagctaggaaat
gaggttggatatagcataaggtttgaggactgtacttcagagagaactgttataaaatat
atgactgatgggatgctgttgagagaattcttaggtgaacctgatttagagtcatacagt
gtaatgataatagacgaggctcatgagaggacactgcacactgatgtattgtttggtctg
gtgaaggacattgctagatttagacctgatcttaagctacttgtatccagtgcaaccatg
gacactaagaaattctctgaattttttgacgatgctccgatatttcgtattccagggcgt
cgctatccagttgatctttactatacaaaggcaccagaggctgattatcttgatgctgcc
gttgtgtctgttctccagattcacctcactcaacccagaggggatatactggtatttctt
acaggtcaggaagagattgagacaacatacgaaatgttaaaagaaagaacagctaagtta
gggtcacggattggagaactcgtcatacttccaatatatgccaatcttccgtctgatatg
caggctaagatatttgagccaactccacctggagctaggaaggttgttcttgctactaat
attgcagagacctcactgactattgatgggattatatttgtgattgatccaggattctgt
aaacaaaagtcgtataatccaaggactggcatggaatcattagtggtcgttccttgctca
aaggcatcttctaatcagagagcagggagggctggaagagttgctgctggaaagtgtttc
cgtctctttacctcctgggcttatcacaatgaaatggaagacaccacaataccagaaatc
cagcgtactaatcttggtaatgttgttctcttactaaagagccttggtattaatgatctg
attaattttgacttcatggatccacctcctcccgaaaccttaatgctagcattagagcag
ttatatgcactaggggcactcaatcatatgggggaactcactaaacttggtcgtagaatg
gctgagttccctgttgatcctgctatgtcaaagatgctcatagtttcagaaaagtatggt
tgtagcgaagaaatactaaccattacagctatgctgtctgtcaacaatgcaatattctat
agaccaaaggatcgtgtagtacatgctgatacagcaagacaaagtttttttagacccggg
ggagatcacttgacattgctagcagtttataatgattgggtatctacagactactcgaca
caatggtgctttgataatttcattcagcacagatcaatgaaacgtgctagagatgtgcgt
gatcaactagaaggactcatggaaagagttgagattgatctagctagtagtgaggatgtt
gttgccattaggaaggcaataactgctgggtacttttatcatgctgcccgtctgtctaaa
ggaggctatagaacggcaaagcatcaacaagtggttcacattcacccaaacagtagtttg
tttgaggaccagccaagatgggtcatatattttgagctagtgtttaccagtaaagagtac
atgagacaggtgatagagattgataatcagtggctattagaagtagcccctcactattat
aaagcaaaggacatacaagatgagaataggaagatgccaaagggagcaggagcatcacgg
gacgacactagattcgacaatcagttttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (57)   
   KEGG ORTHOLOGY (1)   
   RefGene (53)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (78)   

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