KEGG   Amphimedon queenslandica (sponge): 105312694
Entry
105312694         CDS       T02284                                 
Name
(RefSeq) RNA polymerase II-associated protein 1-like isoform X2
  KO
K20826  RNA polymerase II-associated protein 1
Organism
aqu  Amphimedon queenslandica (sponge)
Brite
KEGG Orthology (KO) [BR:aqu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aqu03021]
    105312694
Transcription machinery [BR:aqu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     105312694
SSDB
Motif
Pfam: RPAP1_C RPAP1_N
Other DBs
NCBI-GeneID: 105312694
NCBI-ProteinID: XP_011403848
Position
Unknown
AA seq 1259 aa
MLRITPFTHVTCFIMLKRPRHTETEEDLLSLQESFFSSKEQCSTKISKRESQEASRNPPE
KRNIISLPSSIPADISNHESMEFHQDIPGVVDVLQPVKDRVQQDPMEPVIPAPPPGYGFP
KPQKLSHFAKRGGGRKGGKSLFAQQFDSQNVSLSTPEAMEGEGGERDKIEPLVAQVKERL
FISDKTIVDTNSHAFAQSRLISGDGLRDVGATPLEVEKELSSIHTENTQRLVAMTEQELI
EEKGKMEKLLGPQLVAFLQSRAKTKLTKAPPPVVPVPQTSLSSLGTSSDQSKWLHMNVEE
KEKTRWMEDVKIDPSKMPEFYRETRFSLNGLIIPRDVGVAISSDKALHHHGDEPECAGYT
LGELSRLALSSVHQQRILALQVLSFIMKRSVHGEYKGLIEGHPLSVLVESEVLTMFRYTL
DESPESLQSVAVYGFHCLLVLPAQDYLLSWHHGSSIGHLLPYLTPLQRERDEEEESDHVI
KDDIVKGLLKMTLLPRLRYILEVCQPQEGVAVKILEILIRLSQHSLQAADEILHCPRLIT
FIFNSFLPLNPTNGGDCFYSKPHPLAMKLMASLCRASRHIAKELISTHNLLPVILNHVLI
FQDHTPSLTSEACRVWSVLLGYSLTVETVSDTLPSLLNIFSSPSPFLLPSDKLERVSSLY
LLLSSALAAIVTIPSYTSPSFHVVDHALKALTRVLRECRDSDKDISLDIVQYITSLLSIP
CVYYRAFSQRPELRVNPVSLLEEVESVVNGVMKLLLSSKLYSFITKTLLSLLEVLDSLSS
FSYLPSFISSSLSSKPAIYNKDAMEEKDYPLLSHNQSVALVFSDLLSLSQQLCLSLCQLH
HGVAIDICQLVLSSGSHWIQLMEKFVNTSITNSSLPYLHVYQCLFSTVKLLLLEPSALDA
SQLCLLHCVSLSLLTYSPLGYESHAIDLLKSIIFNPFLYIDGQKDVTPPLSNTISFESIS
PHLPSVNDMYVKLCSSFISEKDVVRSSCVMNGDMSQVDTQCLPSQTKFVLPSNWLHLPLL
AKIDENQTDGDLVTSHVSHCLYFILFLETQRSQFMQQTSCSERLIRVMSTFLISSDIFFE
PVISSSLSSLFSCYSNPNFFRFVDFSLSPSFQEFHTNLLDHFAAVSYGHQTFSTFLLFPL
QQRHSVSFRKDFWIDHTHILRLITLAPSQFSLPLDSFLYPIEWESDLLNQYLRVLASEVI
NEQRNPLLFGIAAHHVSSAINSTKERSQDYTGSSETCKRLASAVERLPNQLLRRRLLSL
NT seq 3780 nt   +upstreamnt  +downstreamnt
atgctccgtataactccgttcactcatgtcacgtgcttcatcatgttaaagagacccaga
cacacagagacagaggaggacctcctctcccttcaagagagcttcttctcctctaaggag
caatgctcaaccaaaataagcaaaagggagagccaggaggccagtagaaacccgcctgag
aagaggaacatcatctctttacctagttccattcctgctgatattagtaatcatgagagt
atggagtttcatcaagatatccctggagttgtagatgtacttcagccagttaaagatagg
gtacagcaagatccaatggagccagtaattccagcacctcctcctggctatggttttcca
aagcctcaaaaactatcacattttgcaaagagaggaggaggaagaaaaggaggtaaaagt
ctttttgctcagcaatttgattctcagaatgtcagtctgagtacgcctgaagccatggaa
ggagagggaggagagagagacaagattgaaccacttgtagctcaagtaaaagagagactg
ttcataagtgataaaactattgttgataccaattctcatgcatttgctcaatcgagactg
ataagtggggatgggctaagagacgtgggtgcaacccctcttgaagttgagaaggaactc
tccagcatacacactgagaatactcaaagactggtggccatgacagagcaagagctgatt
gaggagaaaggaaagatggagaaacttcttggtcctcaacttgtcgcattcctccagtct
cgtgctaagaccaaattaaccaaagctcctcctcctgttgtacctgttcctcaaaccagt
ttatccagtttgggtacctcgtctgaccagtctaaatggcttcatatgaatgtagaagag
aaagagaagacaagatggatggaggatgtcaaaatagaccctagcaagatgccagagttt
tatcgggagacaaggttttcactcaatggtctaataatacctcgagatgtgggcgtggct
atttcatctgacaaggctcttcatcatcacggagatgaaccggaatgtgctggttacacc
ttgggagaattgagtagactagctctcagttcagttcaccagcagagaatactggcactt
caagtcctctcattcattatgaaaagatctgttcacggtgaatataaaggattgattgag
ggtcatcccctctctgttctagttgagtctgaagtattgacaatgtttcgttatacactg
gatgagtcaccagagagcttacagtcggtagctgtctacggtttccattgtttgttggtt
ttaccagctcaagattatctcctctcttggcatcatggctcctccattggtcatcttctc
ccttacctcactcctctccaaagagagagagatgaagaggaagagagtgatcatgtcatc
aaagacgacatcgtcaaaggattgcttaagatgacactgttgccacggttgcgatacatt
ttagaggtgtgtcagccgcaggagggcgtggcagtaaagatattagaaatattaatacga
ttatcacagcattcattacaagcagctgatgagattcttcactgtcccagactaataact
ttcatttttaattctttccttccccttaatccaaccaatggtggtgactgcttttatagt
aagccacacccactggctatgaaactaatggccagtctctgcagagcaagtcgacacatt
gcaaaagaattaatttctactcacaatctcctgccagttattctcaatcacgttctcatt
ttccaagaccacaccccctctttgacatcagaggcttgcagggtgtggtctgtgttgcta
ggatacagtctaacagtcgaaactgtcagtgacacactaccaagtcttttaaatatcttt
tcaagtccatctccattcttattgccttcagataaactagagcgagtctcttctttatat
ctcctcctttcctctgcccttgctgccattgttacgataccctcgtatacttctccttca
tttcatgtcgttgatcacgctctcaaagccttgacgagagttttaagagaatgcagagat
tccgataaggatatcagcttggatattgtccagtacattacatctttattgagcattccc
tgtgtttattacagagccttcagtcagaggcctgagttaagagtgaatccagtttcattg
ctagaggaagttgagtcagtggtaaatggagtgatgaagttattgttgtcatcaaaactg
tattctttcatcactaagactcttctttcccttctagaagtactggattctctatcatca
ttctcatacttaccatctttcatatcatcttcactctcttccaaaccagccatttacaat
aaagacgcaatggaagagaaggattatccccttctgagtcacaaccagtctgttgctctt
gtttttagtgatcttctctccctctcacagcagctctgtttgtcactgtgtcagctccat
catggagtagccattgatatttgtcagcttgtgttgagtagtgggagccattggattcaa
ttgatggagaaatttgttaatacaagcataacaaattcatctttgccttatcttcatgta
tatcagtgtctcttctcaactgttaaattattacttttagagccaagtgcattggatgca
tctcaactatgcttgcttcactgtgtctcgctctctctattgacctattcacctcttggc
tatgaatcgcatgccatagatctcttgaaatcaatcatatttaatccattcctttacata
gacggacaaaaggatgtgactcctcccttaagtaataccatctcatttgagtctatttcc
cctcatctcccatctgttaatgatatgtatgtgaagctctgtagttcattcatcagtgag
aaagacgtggtccgttcctcttgtgtcatgaatggagatatgtctcaagtggatacgcag
tgtctccccagtcagacaaaatttgtattaccgtctaattggctccacctgcccctcctt
gctaagatcgatgaaaatcaaacggatggtgatcttgtcacatctcatgtgtcacattgc
ttgtattttatattatttcttgagactcaacgcagtcagtttatgcagcagaccagctgt
tctgagagattgataagagtaatgtcaactttcttaataagttctgatattttctttgag
ccagtaatcagttcctctctctcttctctcttttcttgttattctaacccaaactttttt
cgttttgttgatttttctctcagtccttcatttcaagaatttcatactaacttgcttgat
cattttgctgctgtctcatacggacaccaaaccttttctactttcctcctctttccattg
cagcaaagacactctgtctctttccgtaaagacttttggattgaccacacgcatattctc
agattaatcactcttgccccttctcaattctcattaccactggactcattcctgtaccca
atagaatgggaatcagacttgttgaaccaatatctcagagtattggcatcagaagtcatc
aacgagcaacgtaaccctcttttatttggcattgctgctcatcatgtctcttctgctatt
aattctacaaaggagagatcacaggattacactggtagtagtgagacatgcaagaggtta
gcttctgctgtggaaagacttccaaatcaactattgagaagacgtttactttctttgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (69)   
   KEGG ORTHOLOGY (1)   
   RefGene (65)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (78)   

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