KEGG   Rhizobium rhizogenes K84: Arad_0004
Entry
Arad_0004         CDS       T00850                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ara  Rhizobium rhizogenes K84
Pathway
ara03030  DNA replication
ara03430  Mismatch repair
ara03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ara00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Arad_0004 (dnaQ)
   03430 Mismatch repair
    Arad_0004 (dnaQ)
   03440 Homologous recombination
    Arad_0004 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ara03032]
    Arad_0004 (dnaQ)
   03400 DNA repair and recombination proteins [BR:ara03400]
    Arad_0004 (dnaQ)
Enzymes [BR:ara01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Arad_0004 (dnaQ)
DNA replication proteins [BR:ara03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Arad_0004 (dnaQ)
DNA repair and recombination proteins [BR:ara03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Arad_0004 (dnaQ)
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1 HTH_32
Other DBs
NCBI-ProteinID: ACM24809
UniProt: B9JG26
Position
1:3130..3840
AA seq 236 aa
MREIIFDTETTGLDNKADRIIEIGGIELFNHFPTGKTLHLYINPGDRKVHPDALAVHGIT
DESLKDKPPFADVADEILAFFEGAKWIAHNATFDMGFVNAEFNRLGRPPILPDMVIDTLA
MARRKHPMGPNSLDALCRRYGIDNSHRTRHGALLDSELLAEVYIEMIGGRQTALGLGSSN
GSSARSRQNNDVEEVVVEILARPQPLPGRVSETEEAAHAALVAKLGEKGIWSKYRA
NT seq 711 nt   +upstreamnt  +downstreamnt
atgcgcgagatcatcttcgatacggaaaccactgggctcgacaacaaggccgaccgcatc
atcgaaatcggcggcatcgaactcttcaatcactttccaactggcaagaccctgcatctc
tatatcaatcccggcgatcgcaaggttcatccggatgcgctggccgtgcatggcatcacc
gatgagtccctaaaggacaagccgccctttgccgacgtcgccgacgagatccttgccttt
ttcgagggagcgaagtggattgcccacaatgccaccttcgacatgggtttcgtcaatgct
gaatttaaccggcttggccgaccgccgatcttgcccgacatggtgatcgatacgttggcc
atggcgcggcgcaagcatccgatggggccgaactcgctcgatgcgctctgccgtcgctac
ggtatcgacaattcccaccgtacccgccacggcgcgcttctcgactccgaacttctggcc
gaagtctatatcgagatgatcggcggccggcagacggcgcttggcctcggcagcagcaac
ggttcgtccgcccgatcccgccagaataatgacgtggaagaggtcgttgtcgaaatcctg
gcgcggcctcagcccttgccgggcagagtgagcgagaccgaagaggccgctcacgccgcc
ctggtcgccaagcttggcgaaaaaggcatatggtcgaaataccgcgcgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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