KEGG   Rhizobium rhizogenes K84: Arad_12436
Entry
Arad_12436        CDS       T00850                                 
Name
(GenBank) ABC transporter, ATP-binding protein
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
ara  Rhizobium rhizogenes K84
Pathway
ara02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ara00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Arad_12436
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ara02000]
    Arad_12436
Transporters [BR:ara02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    Arad_12436
SSDB
Motif
Pfam: ABC_tran AAA_21 oligo_HPY SMC_N AAA_16 AAA_22 AAA_29 nSTAND1 NACHT RsgA_GTPase Sigma54_activat Mg_chelatase ATP-synt_ab AAA_5 APS_kinase nSTAND3 AAA AAA_23 AAA_25 MobB
Other DBs
NCBI-ProteinID: ACM31403
UniProt: B9JQI4
Position
pAtK84c:332885..334561
AA seq 558 aa
MSQSQPAATAPLVEIENIDIRLPEGGERELAVHDATLSIARGEVLCIVGESGSGKSVLAS
AIAGLLPGNGLRVERGNLRFAGEDVLSLGETALRRLRGARIGYIFQEPMTALNPLLTIGR
QIAEALKAHGHPAPPERIAELLAAMRLPDPGTLRRRYPHELSGGQRQRVAIAIAMACGPD
LLIADEPTTALDVTTQAEILRLILDLRARRGLAVLFITHDFGVVRDIADRIVVMQNGEIV
EHGNAEQLLSAPTHPYTRRLLAAVPKLEARRSPLASDLPAALELEGIHKTHFTRRHFLGS
ARPATQALGGIDLTLRIGETVALVGESGSGKSTLGQVITGLVERDAGTFRLSGEAIGRAR
DLFTRERRPAVQMVFQDPQSSLNPRHSIRRILTEPVLQTGLSKEEAETRMMELLLRIGLD
PSSADRKPHAFSGGQRQRIGLARALMPRPRLLVADEPVSALDVSVQAQVLDLLAELQSDL
GLAMLFITHDLRVAARVADRIAVMQHGVIVEEAATADLLRTPRSTYARALIAAVPGRNGE
TEPVANSSSRILEETPHD
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgagccaatcgcaacccgcagcgacagcgcccctggtcgaaatcgaaaatatcgatatc
cgcctcccagaggggggcgagcgagagcttgccgttcacgacgcgaccctttccattgcg
cgcggcgaagtcctctgtattgtcggcgaaagcggctcgggcaagtcggtgcttgcctca
gccatcgccggccttcttcccggcaacggccttcgggtggagcgaggaaacttgcgcttc
gcgggtgaagatgtgctttcccttggtgaaaccgcgctccggcgcctgcggggtgcgcgg
atcggctacatattccaggagccgatgacggcgctcaacccgctattgaccatcggtcgg
cagattgcggaagcgcttaaggcccatggccatcccgcaccgccggaaaggatcgcggaa
ctccttgctgccatgcggctgcccgatccgggcacgctacgtcgacgctacccgcacgaa
ctttcagggggccagcgccaacgcgtggcgattgccatcgcgatggcctgcggacccgat
cttctgatcgccgacgaaccgaccacagcgctggatgtgacaacgcaagcggaaatcctg
cggctcattctcgatctacgtgcccgtcgcgggctcgcagtgctgttcatcacccatgat
ttcggcgtggtacgggacatcgccgaccgcatcgtcgttatgcaaaacggcgagatcgtc
gaacacggaaacgctgaacaattgctcagtgcgccgacccatccctatacgcgtcgactg
cttgcagcggtgccaaagcttgaagcccgccggtccccacttgcttcggacctgccggca
gcactggagctcgaaggcattcacaagacgcatttcacccggcgccacttccttggctct
gcgcggccggcaacacaagcgctggggggtatcgatctgacattgcgcatcggcgagacg
gtagcgctggtcggtgaaagcggctcggggaaatccactcttgggcaggtcatcaccggc
cttgtcgaacgcgatgccggcaccttccgcctttccggcgaggcgataggccgggctcgg
gatctgttcactcgcgagcgacgacctgccgtgcagatggtgttccaggatccgcaatct
tcgctcaatccacgccatagcatccgccgcatcctgacggagccggtgctgcagaccggc
ttgtcgaaggaagaagccgaaacccgcatgatggaactgctcctgcgcatagggctggat
ccttcatccgccgaccgaaagccacatgccttttcaggcggccagcgccagcgcatcggc
cttgctcgcgcgctgatgccgaggccgcgtttgctggtggcagacgagccggtctccgcg
cttgacgtatctgtccaggcgcaggtcctcgatctcctggccgaacttcaaagcgacctc
ggactagccatgttgttcatcactcacgatctgcgcgtagcagctcgggtggctgaccgc
attgcggtgatgcaacacggcgtcatcgtggaagaggccgcaaccgctgatcttctgcgg
acgccgcggtcgacttacgcgcgcgcgcttattgccgctgttccgggccggaacggcgag
acggaaccagtcgcaaacagttcttcacgcatccttgaagagacaccacatgactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (2)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (34)   

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