KEGG   Rhizobium rhizogenes K84: Arad_12473
Entry
Arad_12473        CDS       T00850                                 
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
  KO
K02035  peptide/nickel transport system substrate-binding protein
Organism
ara  Rhizobium rhizogenes K84
Pathway
ara02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ara00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Arad_12473
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ara02000]
    Arad_12473
Transporters [BR:ara02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    Arad_12473
SSDB
Motif
Pfam: SBP_bac_5
Other DBs
NCBI-ProteinID: ACM31430
UniProt: B9JQL1
Position
pAtK84c:complement(362997..364652)
AA seq 551 aa
MPLFSRTRSTRGRSYVPPRRRGGLLKTVAFLVGAPFLFGAPQAFAATPADTLVVAKYISD
LITLDPAEVYEATGGEVVNNIYERLITFDPSDFTKPVGGVAESWTVSDDGLTFTFKIREG
LFFASGRGVTAEDAAFSLERVIRLGKTPVFYLTQFGWSKENIADRVSFTGEKTLVLKLDK
PYAPDLFLKVLSSTVSSVVDKQEALKHETDGDLGAGWLKKNTAGSGPYQLAGWTPNEAVV
LTANTHYKREPVALKSVVLRHIPEAATQRLLIEKGDVDIARNLSADQIQALSTNSNITII
SSPKTDVSYIALNRGVKPLDDAKVQQALRWAIDYDGIVGSILKGQAKVHQSFWGSGSGGS
LDETPYKLDIAKAKSLLEAAGYKDGFKLKLDVSSRSPDREISQSLQSTFGQAGVKVDLNT
LDRAQLQTRFRGRQHDAVFFGWSPDYLDVHASASFFTINDDDSDSSKNKNAAWRDHWLVP
ELTKKTLSGLTESDPAKREAIYLDLQKQVRDNSPFIVIYQQLGQVPVRANVKGFVPGPSW
DTPAYWRTTKS
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgcctctattttctcgaacgcgttcgacgcgcggccggtcgtatgtcccacctcgccgc
cgcggcggcttgctcaaaaccgtcgcattcttggtgggcgctcctttcctcttcggcgcc
ccgcaggcctttgccgcgacgcctgccgacaccctcgtcgtggcaaaatacattagcgat
ctgatcaccctcgaccccgctgaagtctacgaagcgactggcggcgaggtcgtcaataat
atctatgaacggttgatcaccttcgatccttcggatttcacgaagccggtcggcggggtg
gccgaatcctggacggtttccgatgacggtctgacgttcaccttcaagatacgtgaaggt
ttgttctttgcatccggtcgtggcgtgaccgccgaggatgcagcgttttccttggaacgg
gtcatccgtcttggaaagacaccagtcttttacctaacccagttcggctggtcgaaggag
aatatcgccgaccgggttagcttcacaggcgagaagaccctcgtgctcaagcttgataag
ccctacgcacccgatctttttctgaaggtactgtcatcgactgtatcctcggtcgtggac
aagcaggaagccctcaagcacgagaccgacggagatctcggcgccggctggttgaagaag
aatactgccggctccggtccctaccagctcgccggctggacgcccaacgaagccgtggtc
cttaccgccaacactcactacaagcgtgaaccggtcgcccttaagagcgtcgttctccgt
cacattcctgaggccgcgacccaacgcctcttgatcgagaagggcgatgttgacatcgcg
cgcaacctgagtgccgaccagatccaagcactctcaacaaattcgaacatcaccattatc
tccagccccaagacggacgtgagctatatcgcgcttaatcgaggtgttaagcccttggac
gatgccaaggtgcagcaggctctgcgttgggcgatcgactatgatgggatcgtcggcagc
attctgaaaggacaggcgaaggtccatcagagcttttggggcagcggctccggcggatcg
ctggacgagacgccatataaacttgatatcgccaaggcaaagtcgctgctcgaggcggcc
gggtataaggacgggttcaagctcaagcttgacgtgtcgagccggtcgcccgatcgggag
ataagccagtccttgcagtccacctttggtcaggctggggtcaaagtcgatttgaacacg
ctcgaccgggcacagctgcagacccggtttcgcggacgccagcatgatgcggtcttcttt
ggatggtcgccagattatctggacgttcatgccagtgcttcgtttttcacgattaatgac
gatgacagcgatagttccaagaacaagaacgcggcctggcgtgatcactggctcgttccg
gagctgaccaaaaagacgctgtctggcctaacggaatctgatcccgccaagcgagaagcg
atctatctcgatctgcagaaacaggtccgcgataattcgccgttcatcgtcatctaccag
cagctcggccaggtgccggttcgcgcaaatgttaaggggttcgtgccaggcccgagctgg
gacaccccagcctattggcgcaccaccaaaagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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