KEGG   Rhizobium rhizogenes K84: Arad_14179
Entry
Arad_14179        CDS       T00850                                 
Symbol
trbC
Name
(GenBank) conjugal transfer prepropilin
  KO
K20528  type IV secretion system protein TrbC
Organism
ara  Rhizobium rhizogenes K84
Pathway
ara02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ara00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Arad_14179 (trbC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ara02044]
    Arad_14179 (trbC)
Secretion system [BR:ara02044]
 Type IV secretion system
  Trb secretion system protein
   Arad_14179 (trbC)
SSDB
Motif
Pfam: TrbC DUF4179
Other DBs
NCBI-ProteinID: ACM31037
UniProt: B9JPG8
Position
pAtK84b:complement(127508..127915)
AA seq 135 aa
MSRKTQITLALAALAAFSWISIVNPAFASSGGGGLPWESPLQQIQQSITGPVAGFIALAA
VAIAGAMLIFGGELNDFARRLCYVALVGGVLLGATQIVALFGATGASIGEFEGRAGSWNV
ELSSELRTEGEGAHG
NT seq 408 nt   +upstreamnt  +downstreamnt
atgtcgcgtaagacccaaatcacccttgcgcttgcagcgctagccgccttctcctggatc
agcattgtcaatccggcgttcgcctcttcgggcgggggtgggttgccgtgggaatctccg
ctgcaacagatccaacagtcgatcacgggaccggtggctggattcatcgcactcgcagcg
gtggcgatcgccggtgccatgctgatcttcgggggagaactgaacgacttcgccaggagg
ctttgttacgtcgcccttgttggcggcgtgttactcggcgcgacccagatcgtcgctctc
ttcggtgcgacgggcgcttcgatcggcgagtttgaggggcgagccggatcttggaatgtc
gaactgtcttcggagcttcgaacggaaggggagggggctcatggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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