KEGG   Rhizobium rhizogenes K84: Arad_9603
Entry
Arad_9603         CDS       T00850                                 
Symbol
putA
Name
(GenBank) proline 1-pyrroline-5-carboxylate dehydrogenase/proline dehydrogenase protein
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
ara  Rhizobium rhizogenes K84
Pathway
ara00250  Alanine, aspartate and glutamate metabolism
ara00330  Arginine and proline metabolism
ara01100  Metabolic pathways
ara01110  Biosynthesis of secondary metabolites
Module
ara_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:ara00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    Arad_9603 (putA)
   00330 Arginine and proline metabolism
    Arad_9603 (putA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ara03000]
    Arad_9603 (putA)
Enzymes [BR:ara01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     Arad_9603 (putA)
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     Arad_9603 (putA)
Transcription factors [BR:ara03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    Arad_9603 (putA)
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PRODH
Other DBs
NCBI-ProteinID: ACM30610
UniProt: B9JL18
Position
2:2266099..2269803
AA seq 1234 aa
MTATAKFADKPTSPPAPPFAQFAPPIREQGPLRRAITDAYRRPETECLPPLLEAATLPDA
SRNAVKETARILIEALRAKHKGTGVEGLVHEYSLSSQEGVALMCLAEALLRIPDTATRDA
LIRDKIADGDWKSHLGGGRSLFVNAATWGLVVTGKLTSTVNDKGLSAALTRLIARCGEPV
VRRGVDMAMRMMGEQFVTGETIDEALRRARTLEAKGFRYSYDMLGEAATTQADAERYYRD
YEAAIHAIGKASAGRGIYEGPGISIKLSALHPRYARSQTERVMSELLPKVKALAVLSKRY
NIGLNIDAEEADRLELSLDLLEALCLDPDLAGWNGMGFVVQAYGKRCPYVLDFIIDLARR
SEHRLMVRLVKGAYWDAEIKRAQLDGLAGFPVYTRKVYTDVSYIACAKKLLAATDLIFPQ
FATHNAQTLATIYQMAGSDFSVGKYEFQCLHGMGEPLYEEVVGDDNLDRPCRIYAPVGTH
ETLLAYLVRRLLENGANSSFVNKIADPAVPVADLIADPVEVVRAMKVVGAQHDKIALPAD
LFHDVRRNSSGIDLSNETSLAGLAERLLASAAMEWVAKPLLADRSERGETRPVLNPADHS
DLVGHVTELGTDDAAIVMRLAAEAVPEWAAISPTERASCLERAADLMQAEMETLIGLVMR
EAGKSAANAIGEVREAIDFLRYYAEQARKVLKPDSVPLGPIVCISPWNFPLAIFTGQIAA
ALVAGNPVVAKPAGVTPLIAAQGVRILHEAGIPRGALQFVPGSGRTGAALVGAPETSGVM
FTGSTEVARLIQAQLAERLSKFNKPIPLIAETGGQNGMIVDSSALAEQVVGDVIASAFDS
AGQRCSALRVLCLQEEIADRTLTMLRGALGELSVGRTDRLAIDIGPVIDDNAKRGIDEHI
ESMRKLGCKVQQLDLPPAAAKGTFVAPTIIELKNLADLKKEVFGPVLHIIRYQRKKLDKL
IDAVNASGYGLTFGLHTRLDGTIAHVTGRVKAGNLYVNRNIIGAVVGVQPFGGRGLSGTG
PKAGGPLYLRRLVASATEPLRDASVKTDQTVSDFLTWLDSKGVPQAAGRAGAIASGSSLG
LAIELPGPVGELNLYQLHPRGKILLVPQTALGLYVQVAAALATGNSIVVDASSGLQDELR
DLPEKVANRISWSNDWAADGPFAGALIEGNADRIKAAVQAIAALPGPLVLVQGASSDEIA
KGSDAYCLNWLLEEVTTSINTAAAGGNASLMSIG
NT seq 3705 nt   +upstreamnt  +downstreamnt
atgacagccaccgccaaatttgccgataagccgacgtccccccccgctccgccatttgcg
cagttcgcgccgcccatccgcgagcaaggtcctctgcgccgggcaattaccgatgcctac
cggcgaccggagacggaatgcctgccgccgctgctcgaggcagcaaccttgccggacgcc
agccggaatgccgtcaaggaaaccgcccggatattgatcgaggctcttcgtgccaagcac
aagggaaccggcgtcgagggtctggtgcatgaatattcgctgtcgagccaggaaggcgtc
gcattgatgtgcctcgccgaagccctgcttcgcattccggacaccgccacgcgcgatgcc
ctgatccgggacaagatcgccgacggcgactggaagtcgcatctgggcggcggtcgttct
ctgttcgtcaacgccgccacctggggacttgttgttaccggcaagctcacctcgaccgtg
aacgacaaggggctgtcagccgcgctgacgcgattgatcgcgcgctgcggcgagccggtc
gttcgtcgtggcgtcgacatggccatgcggatgatgggcgagcaattcgttaccggcgag
accatcgacgaggcgctgcggcgcgcccgcacgcttgaggcgaagggcttccgctattcc
tatgacatgctgggcgaagccgcgacgacgcaggccgacgccgagcgttattatcgcgac
tatgaggcggcgatccatgcgatcggcaaggcttcggccggccgcggcatttatgaaggc
cccggcatatccatcaagctttccgccctgcatccgcgctatgcgcgttcgcagaccgaa
agggtcatgagcgaactgctgccgaaggtgaaagccctcgccgttctctccaagagatac
aatatcggcctcaacatcgatgccgaggaagccgaccggcttgagctgtcgctcgatctt
ctggaggcgctctgccttgatcccgatcttgccggctggaacggcatgggcttcgtggtc
caggcctatggcaaacgctgcccctatgtcctcgatttcatcatcgatctcgcccgccgc
tcggagcaccggctgatggtccgtctggtgaagggcgcctactgggatgccgagatcaag
cgcgcccagcttgacggccttgccggcttccccgtctacacccgcaaggtctataccgat
gtttcctacatcgcctgcgccaagaagctgctggcggcgaccgatctgatcttcccgcaa
tttgccacgcataatgcgcagacactggcgacgatctatcagatggccggcagcgacttt
tccgtcggcaagtatgaattccagtgcctgcatggcatgggcgagccactgtacgaggaa
gtcgtgggcgacgacaatctcgatcgcccctgccggatctacgcacccgttggcacgcat
gagacgttgcttgcctatctcgtcaggcgcctgcttgaaaacggcgccaattcctctttc
gtcaacaagatcgccgaccccgccgttccggtcgcagacctgattgccgatcccgtcgaa
gtggtgcgcgcgatgaaagtcgttggcgcccagcacgacaagatcgcccttcccgccgac
ctcttccatgacgtccgcaggaattcgtccggcatcgatctgtcgaacgaaacatcgctc
gcaggccttgccgaacgcctgctcgcttcggcggcaatggaatgggtcgccaagcccctg
ctcgcggataggtccgaacgcggtgaaacccggccggtcctcaatcccgccgatcattcc
gatcttgtcggtcatgtcaccgaattgggcaccgacgatgcggccatcgtgatgcgtctc
gccgccgaagcggttccggaatgggctgctatcagcccgacggaaagagcaagctgcctg
gaacgggccgcggatctgatgcaggcggagatggaaacgctgatcggcctggtgatgcgg
gaagccggaaaatcggccgccaacgccatcggcgaagtcagggaagccatcgactttctg
cgctactatgccgagcaggcgcgcaaggtgttgaagcctgacagcgttccgctcggtccg
atcgtctgcatcagcccatggaattttccactggcgattttcaccggccagatcgcggcc
gcgcttgtcgccggcaatccggtcgtcgccaagccggccggcgtcacgccgctgattgcc
gcgcaaggcgttcgcatccttcatgaagcgggaattccgcgcggggcgctccagttcgtg
cccggcagcggccgaacgggtgctgccctcgtaggcgccccggaaacatccggcgtaatg
ttcaccgggtcgaccgaagtggcccggctcatccaggcgcagcttgcggagagactgtcg
aaattcaacaagccgatcccgctaatcgccgagaccggtgggcagaacggcatgatcgtc
gactcctcggcgctcgccgaacaggtcgtcggcgatgtcatcgcctcggccttcgacagc
gccggacagcgctgctcggcccttcgcgtcctctgcttacaggaggagatcgccgaccgg
acattgaccatgctgcgcggcgcgcttggcgaattgtcggtcggccgcaccgaccggctg
gccatcgatattggccccgtgatcgacgacaacgccaagcgcggcatcgacgagcatatc
gaaagcatgcgtaagcttggctgcaaggtacaacaactcgatcttccgcccgccgctgca
aagggaacattcgtcgccccgacgatcatcgagctgaagaacctggcggatctcaagaag
gaagtattcgggccggtactgcatatcatccgctaccagcgcaagaagctcgacaagctg
atagatgcggtaaatgcctcgggttacggtctgaccttcgggctgcacacacggcttgac
ggcaccatcgcgcatgtcaccgggcgcgtgaaggcaggcaacctctacgtcaatcgaaac
atcatcggcgccgtggtcggtgtccagccgttcggcgggcgcggtctttccggcaccggg
ccgaaggccggcggccccctctatcttcgccggctggtcgcctccgcaactgagccgctt
cgggatgctagcgtcaagacggatcagaccgtaagcgatttcctcacctggctcgacagc
aagggagtgccgcaggcggccgggcgggcgggcgctatcgccagtgggtcatcgctgggt
ctcgccatagaactgcccggccctgtcggcgagctgaacctttatcaactgcatcctcgc
gggaagatattgctcgtgccgcagacggcgctcggcctctacgttcaagttgcggcagcc
cttgccacgggcaattcgatcgtggtggacgcttcgtcagggcttcaggacgaacttcgc
gacctgccggaaaaggttgcaaaccggatctcctggtcgaatgactgggcagcggatggc
ccctttgcaggagcgctgatcgaaggaaatgcggacaggataaaggcagccgttcaggcc
attgcggctcttccggggccattggttctcgtccagggcgcatcgtccgacgagatcgcg
aagggatctgatgcctattgcctcaactggcttctggaggaggtgacgacctccatcaac
acagcagcagcgggcgggaatgcgagcctgatgtcgatcggatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (15)   
   KEGG COMPOUND (15)   
Chemical reaction (10)   
   KEGG ENZYME (2)   
   KEGG REACTION (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (42)   

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