KEGG   Rhizobium rhizogenes K84: Arad_9771
Entry
Arad_9771         CDS       T00850                                 
Symbol
appF
Name
(GenBank) oligopeptide ABC transporter
  KO
K02032  peptide/nickel transport system ATP-binding protein
Organism
ara  Rhizobium rhizogenes K84
Pathway
ara02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ara00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Arad_9771 (appF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ara02000]
    Arad_9771 (appF)
Transporters [BR:ara02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    Arad_9771 (appF)
SSDB
Motif
Pfam: ABC_tran oligo_HPY AAA_21 AAA_16 AAA_19 AAA_30 NB-ARC AAA_22 SMC_N AAA_29 MeaB PRK AAA TsaE nSTAND3 UvrD-helicase
Other DBs
NCBI-ProteinID: ACM30744
UniProt: B9JLK8
Position
2:2417450..2418406
AA seq 318 aa
MNEPLLSVRNLAKHYTTRGTKTSVLQDISFEIGRGEVVGLVGESGSGKTTIGRSVLRLIE
PSAGSIRFDGIALTTLSASAMRRIRPRMQYIFQDPFASLSPRMTIGEILTEGLTIQGIGT
SKEQLDRAQSALEQVDLPADAIHRYVHEFSGGQRQRIGIARALTLAPDFLVADEPVSALD
VSIQAQVINLLRDLQQRLGLTMLFISHDLAVVEYICDRIIVLYLGRIMEIAPSSELYVSP
QHPYTRALLSAIPSPDPDARCDRQILKGDIPSPANPPSGCVFRTRCPNALPACANAVPKL
REISPGHFKACFRDDLSD
NT seq 957 nt   +upstreamnt  +downstreamnt
atgaacgagcccctgctctccgttcgcaatctcgcgaagcactatacgacccgcggcacg
aagacctccgtcctgcaggatatctccttcgagatcggcaggggcgaagtggtcggcctc
gtcggcgaatccggcagcggcaagacgacgatcggccggtcggtcctgcgcctcatcgaa
ccctcggcaggcagcatccgtttcgacggcatcgccctaaccaccctctcagcatcggcg
atgcggcggattcggccgcgcatgcaatacattttccaggacccgttcgcgagcctctcg
ccccgcatgacgatcggcgaaatcctcaccgagggcctgacgatccagggtatcggcact
tcgaaggagcagctagatcgtgctcaaagcgcgctcgagcaagtggatctgccggccgat
gccatccatcgctacgtccatgaattttccggcggccagcgccagcgcattggcattgcg
agggcactcaccctcgcgccggatttcctggtggccgacgagccggtatcagccctcgac
gtgtcgatccaggcgcaggtcatcaacctcttgcgcgatctgcagcagcgcctcggcctc
accatgctcttcatctcgcatgatctcgccgtggtcgaatatatctgcgaccggatcatc
gtgctctatctcggacgcatcatggagatcgcgccgagcagcgagctctatgtctcgccg
cagcacccctatacgcgagccctgctttcggcgatcccctcgcccgatccggatgcgcgg
tgtgaccggcagatcctcaagggcgatattccaagccccgccaacccgcccagcggctgc
gtcttccgcacccgctgtcccaatgcgctgccggcctgcgccaacgccgtgccgaagctg
cgggaaatctcgcccggtcatttcaaggcctgcttccgcgacgatctctccgattga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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