KEGG   Arcobacter sp. L: ABLL_2469
Entry
ABLL_2469         CDS       T01834                                 
Name
(GenBank) DNA-directed RNA polymerase beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
arc  Arcobacter sp. L
Pathway
arc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:arc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ABLL_2469
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:arc03021]
    ABLL_2469
   03400 DNA repair and recombination proteins [BR:arc03400]
    ABLL_2469
Enzymes [BR:arc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     ABLL_2469
Transcription machinery [BR:arc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     ABLL_2469
DNA repair and recombination proteins [BR:arc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      ABLL_2469
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 Biotin_lipoyl_2 Peptidase_M23 DTP-pb9_A-dom_C
Other DBs
NCBI-ProteinID: BAK74344
UniProt: G2HYZ1
Position
complement(2555370..2559515)
AA seq 1381 aa
MLNSLKSGNRLRVDFAKNPQQIEIPNLLQLQQTSYDTFLMIGQEERSAAGIEKVFKSIFP
IHDVQNRITLDYLGSEVGKPKYDVRESMVRGLTYSIPLKINIRLTLWDLDEKTGEKIGVK
DMKEQSLFIREIPLMTDRTSFIVNGVERVVVNQLHRSPGVIFKEEESNTADNKLIYTGQI
IPDRGSWLYFEYDAKDVLYVRINKRRKVPVTILFRALGYSKEDIVKLFYPIVNIKVKNNK
FLTEFNPDDFMGRIEYDVKDDKGNLVIAAGKRLTLRKAKALIEGGLKLIEYPLEQLMDRS
TANTIYDPESGEVLFDALTNLDELKLKKLLDLGFDNFDIANDLAPGIDNSIINAFKADAE
SLKLLKQTEQIDDENDLSAIRIYKVMRPGEPVTKEAAKDFVKKLFFDPERYDLTKVGRMK
MNHKLGVNVPEYVTTLTYEDVIKTVQYLVKVKSGHGHIDDRDHLGNRRIRAIGELLANEL
HAGLIKMQKAIRDKMTTLSGTLEDIMPHDLVNSKMITSTITEFFTSGQLSQFMDQTNPLS
EVTHKRRLSALGEGGLVKERAGFEVRDVHPTHYGRICPVETPEGQNIGLINTLSTFSKVN
ELGFIEAPYKTVVDGVVTNEIKYYTATQEEGLVIAPGSTKVDENGKIVESLIEARKDGEI
LLMERSSVDLIDISSQMVMGVAASLIPFLEHDDANRALMGSNMMRQAVPLLRPNAPVVGT
GLEKTVARDAWEAIKANRAGLVEKADAKNIYVRGEDENGAFIDHYIVNKNVRTNNNTSFG
QRIAVTEGQFVEKGQVIADGPSMDKGELAVGVNAMVAFMPWNGYNYEDAIILSERLIEED
AFTSVHIYEKEVECRELKHGNEEITRDLPGVKEESIVHLDNSGIVKIGTFVKPGMILVGK
VTPKGEIKPTPEERLLRAIFGEKAGHVINKSLVCPTSMEGTVVDVKVFTKKGYEKDERAI
AEIEAEKAELDLKHHDKLLMLDREEILKINDLLLKSTLIKDVELDDITYKKGETIPVDVL
NNVNRFAMKKVVSSYSKEIEKAYNDIKEHFIKQKAHLRDEHEEKLQILEHDDILPSGVIK
QVKVYIATKRKIKVGDKMAGRHGNKGIVSNIVPKVDMPYLEDGSTVDVILNPLGVPSRMN
IGQILEVHLGLAGKKLGAQIQDIFDAKKADFIAELRTKMSEIASVAKLMNGKAFMDSLSD
DELIQYGQDWAKGVRFATQIFDGVKAEEFAKLFELAKIDSDGKCVLYDGKTGDKMKERVN
VGYMYMLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGATNV
LKEMLTTKSDDVEGRTKAYRAIANGENVPNSGVPETFFVLTKELKALALDVEIFGEVEND
E
NT seq 4146 nt   +upstreamnt  +downstreamnt
atgttaaactctttaaaatctggtaatagacttagagttgattttgcaaaaaatccacaa
caaattgaaattccaaacttattacaactacaacaaacttcgtatgatactttcttgatg
ataggtcaagaagagagatctgctgctggaattgaaaaagtatttaaatctattttccct
atacatgacgttcaaaacagaattacactagattacttaggttcagaagtaggtaaacct
aaatatgatgtaagagaatcaatggttagaggattaacatactctattcctctaaaaatc
aatattagattaactttatgggatttagacgaaaaaactggtgaaaaaatcggtgttaaa
gatatgaaagaacaatctttatttattagagaaattcctttaatgactgatagaacttct
tttatagttaatggtgttgaaagggtagttgttaatcaattacatagatcacctggtgta
atttttaaagaagaagaatcaaatacagctgacaataaacttatttatactggtcaaatt
attccagacagaggttcatggttatattttgaatatgatgcaaaagatgtattatatgta
agaattaataaaagaagaaaagtaccagttactattttatttagagcattaggttattca
aaagaagatattgttaaattattctatccaattgtaaatattaaagttaaaaataataaa
tttttaacagaatttaaccctgatgattttatgggaagaattgaatatgatgtaaaagat
gataaaggtaatttagttattgctgctggaaaaagattaacacttagaaaagcaaaagct
ttaattgaaggtggtttaaaattaattgaatatccattggaacaattaatggatagaagt
acagctaatactatttatgatccagaatcaggagaagtattatttgatgcactaacaaat
ttagatgaattaaaattaaaaaaacttttagatttaggttttgataattttgatattgca
aatgatttagctccaggtattgataattctattattaatgcatttaaagcagatgcagaa
tctttaaaacttttaaaacaaactgagcaaattgatgatgaaaatgatttatcagcaata
agaatctacaaagttatgagaccaggtgaacctgttactaaagaagctgctaaagatttc
gttaaaaaattattctttgatccagaaagatacgacttaacaaaagttggaagaatgaaa
atgaatcataaacttggtgttaatgtacctgaatatgttactactttaacttatgaagat
gttattaaaacagttcaatatttagtaaaagttaaatctggacatggtcatattgatgat
agagatcacttaggtaatagaagaattagagcaattggtgaattattagcaaatgaatta
catgctggtttaatcaaaatgcaaaaagcaattagagataaaatgactactttatctggt
actttagaagatattatgccacatgatttagttaactctaaaatgattacttcaacaatt
actgaattctttacatctgggcaattatcacaatttatggatcaaactaatccattatct
gaagttactcataaaagaagactatcagcacttggagaaggtggtcttgtaaaagagaga
gctggatttgaagtaagggacgttcacccaactcactatggaagaatttgtcctgttgaa
actccagagggacaaaatatcggtcttatcaatactttatcaactttctctaaagttaat
gagttaggatttatcgaagctccatataaaacagttgttgatggtgtagtaactaatgaa
attaaatactatacagcaactcaagaagagggattagttattgctcctggttcaacaaaa
gttgatgaaaatggaaaaattgttgaatcactaattgaagctagaaaagatggtgaaatc
ttactaatggaaagaagtagtgtcgatttaattgatatttcttctcaaatggttatgggg
gttgctgcttctttaattccattcttagaacatgatgatgccaatagagcacttatggga
tcaaacatgatgcgacaagctgttccattattaagaccaaatgcacctgtcgtaggtact
ggtttagaaaaaacagttgcaagagatgcatgggaagctattaaagcaaatagagctgga
cttgttgaaaaagctgatgctaaaaacatttatgttagaggtgaagatgaaaatggtgct
ttcattgatcattatattgtaaataaaaatgtaagaacaaataataatacatcatttgga
caaagaatagctgtaactgaaggtcaatttgttgaaaaaggtcaagttattgctgatggt
ccatctatggataaaggtgaattagctgttggtgttaatgcaatggttgcattcatgcca
tggaatggatataactatgaggatgctattatcttatctgaaagattaatagaagaagat
gcatttacatcagttcacatttatgaaaaagaagttgaatgtagagaattaaaacatggt
aatgaagaaatcacaagagatttaccaggtgttaaagaagaatcaattgttcatttagat
aattcaggtatcgtaaaaattggaacttttgttaaaccaggaatgattttagttggaaaa
gttacaccaaaaggtgaaattaagccaactccagaagaaagattattaagagcaattttt
ggtgaaaaagcaggtcatgttattaataaatcattagtatgccctacatcaatggaaggt
acggttgttgatgttaaagtatttactaaaaaaggttatgaaaaagacgaaagagcaata
gctgaaattgaagcagaaaaagcagaattagatttaaaacatcatgataaattattaatg
cttgatagagaagaaattttaaaaataaatgatttattattaaaatcaactttaataaaa
gatgttgaacttgatgatatcacatataaaaaaggtgaaacaattcctgttgatgtatta
aataatgttaatagatttgcgatgaaaaaagttgtttcatcttattcaaaagagattgaa
aaagcttataatgatattaaagaacattttattaaacagaaagctcatttaagagatgaa
cacgaagaaaaacttcaaattttagaacatgatgatattttacctagtggtgttattaaa
caagtaaaagtttatattgcaactaaaagaaaaattaaagttggggataaaatggctgga
cgtcatggaaacaaaggtatcgtttctaatatcgttccaaaagttgatatgccttattta
gaagatggatctacagttgatgttattctaaatcctctaggggttccatctaggatgaat
attggacaaattcttgaagttcatttaggtttagctggtaaaaaattgggagctcaaatt
caagatatttttgatgctaaaaaagctgattttattgctgaattaagaactaaaatgagc
gaaattgcttctgttgcaaaattaatgaatggaaaagcatttatggattcattaagtgat
gatgaattaattcaatatggtcaagactgggcaaaaggtgtaagatttgctacacaaatt
tttgatggtgttaaagcagaagaatttgcaaaactgtttgaattagcaaaaattgatagt
gatggtaaatgtgttctttacgatggaaaaactggtgataaaatgaaagaaagagtaaat
gttggttatatgtatatgcttaaacttcaccacttagttgatgaaaaagttcatgcaaga
tctactggaccatactctttagttacgcaacaaccagttggaggaaaagctctatttggt
ggacaaagatttggagagatggaagtttgggcattagaagcttatggtgcaacaaatgta
cttaaagaaatgcttacaacgaaatctgatgatgttgaaggaagaactaaagcttataga
gcaatagcaaatggtgaaaatgttccaaattcaggtgtacctgaaacattcttcgtatta
acaaaagagttaaaagctctagctttagatgtagagatttttggagaggtagaaaacgat
gagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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