KEGG   Arthrobacter sp. Hiyo8: AHiyo8_22900
Entry
AHiyo8_22900      CDS       T04181                                 
Name
(GenBank) probable DNA repair helicase RAD25 homolog
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
arh  Arthrobacter sp. Hiyo8
Pathway
arh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:arh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    AHiyo8_22900
  09124 Replication and repair
   03420 Nucleotide excision repair
    AHiyo8_22900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:arh03021]
    AHiyo8_22900
   03400 DNA repair and recombination proteins [BR:arh03400]
    AHiyo8_22900
Enzymes [BR:arh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AHiyo8_22900
Transcription machinery [BR:arh03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     AHiyo8_22900
DNA repair and recombination proteins [BR:arh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     AHiyo8_22900
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 Helicase_C ResIII
Other DBs
NCBI-ProteinID: BAS13987
UniProt: A0A0K2RH90
Position
1620495..1621985
AA seq 496 aa
MGLWNARAAGLDAEKVLDTLLRYSRFPVPHSLLIDIEETMSRYGRLRLEKDPQHGLVMRT
TDYPVLEEVSRAKKIAPLLGPRIDGETVVVHSSQRGQLKQLLLKLGWPAEDLAGYVDGTP
HLIALNEDGWHLRPYQKLATENFWAGGSGVVVLPCGAARPWWGRSHGYELHHHADPGDQH
GRGPAMEGRTPQADVADGGGDRRVFGRGQGSPARHDRDLPGPDHQARRPLPAPGTRGRAR
LGLIIYDEVHLLPAPIFRMTADLQARRRLGLTATLVREDGREGEVFSLIGPKRYDAPWKD
IEAQGYIAPADCVEVRVDLPRDERVAYAMAEDADKYRLCATSETKTHLVEQLVALHQGEP
LLVIGQYIDQLDEIGERLDAPVIKGDTTVKVRQKLFDAFRAGDIKTLVVSKVANFSIDLP
EASVAIQVSGSFGSRQEEAQRLGRLLRPKQDGRAARFYSLVARDTLDQDFAAKRQRFLAE
QGYAYRIMDAKDVPAG
NT seq 1491 nt   +upstreamnt  +downstreamnt
ttgggcctgtggaatgcgcgcgcggcgggactggacgccgaaaaagtcctcgacactctc
ctgcgctattcccgtttcccggtgccgcactctttgctgatcgacatcgaagagaccatg
tcccgctacggccgcttgcgcctggaaaaggacccgcaacacggattggtcatgcggacc
accgactaccccgtactcgaggaagtcagccgggccaagaaaatcgcgccgttgctgggg
cccaggatcgacggcgaaaccgtcgtggtgcattcctcccagcggggacagctcaagcaa
ttgctgctcaagctcggatggccggccgaggacctcgccggctacgtggacggcacgccg
cacctgatcgccttgaacgaggacggttggcacctgcggccgtaccagaagcttgccacg
gagaacttctgggcgggcggcagcggcgtcgtcgtgctgccctgtggcgcggcaagacct
tggtggggccgcagccatggctacgagctccaccaccacgctgatcctggtgaccaacac
ggtcgcggcccggcaatggaaggacgaactcctcaagcggacgtcgctgacggaggagga
gatcggcgagtattcgggcgcggtcaaggaagtccggcccgtcacgatcgcgacctacca
ggtcctgaccaccaagcgcggaggcctttacccgcacctggaactcgtggacgggcacga
ttgggactcatcatctacgacgaggtccatctcctcccggctccgatcttccggatgacc
gcggacctgcaggcccggcggcgcctgggactcacggcgacgcttgtgcgtgaggatggc
cgcgagggcgaggtcttcagcttgatcggtcccaaacgctacgacgcaccgtggaaggac
atcgaagcccagggctacattgcgccggcggactgcgtggaggtccgggtagacctgcct
agggacgagcgcgtggcctacgcgatggctgaggatgcggacaagtaccggctctgcgcg
acgtccgagaccaagacccacttggtggagcagctcgttgccctgcaccaaggcgagccg
ctgctggtgatcggccagtacatcgaccagttggatgagatcggcgagcgcctggacgct
cccgtgatcaagggcgatacgacagtcaaggtgcggcagaagctcttcgacgccttccgg
gccggtgacatcaagaccctcgtggtatccaaggtggccaacttctcgatcgacctaccc
gaggcatccgtggcgatccaagtgtcggggtctttcggttcccgccaggaggaagctcaa
cgcttggggcgcctgcttcggcccaagcaggacggccgcgcggcacgcttctactccttg
gtggcccgggacaccctcgaccaggattttgcggccaaacggcagcgcttcctcgccgaa
cagggctacgcctaccggatcatggacgccaaggacgtacccgccgggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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