KEGG   Arthrospira platensis: NIES39_O04690
Entry
NIES39_O04690     CDS       T02608                                 
Symbol
holB
Name
(GenBank) DNA polymerase III delta prime subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
arp  Arthrospira platensis
Pathway
arp03030  DNA replication
arp03430  Mismatch repair
arp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:arp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NIES39_O04690 (holB)
   03430 Mismatch repair
    NIES39_O04690 (holB)
   03440 Homologous recombination
    NIES39_O04690 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:arp03032]
    NIES39_O04690 (holB)
   03400 DNA repair and recombination proteins [BR:arp03400]
    NIES39_O04690 (holB)
Enzymes [BR:arp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NIES39_O04690 (holB)
DNA replication proteins [BR:arp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NIES39_O04690 (holB)
DNA repair and recombination proteins [BR:arp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NIES39_O04690 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_22 Mg_chelatase
Other DBs
NCBI-ProteinID: BAI93716
UniProt: A0A9W3ZJW3
Position
complement(6005758..6006765)
AA seq 335 aa
MDAFSDLIGQAQAVELLSRVIAQNRIAPAYLFVGIPGVGRSLAARFFIELLLQPTRKNLV
NSSEEDAHKQSIKHRVEMRNHPDLLWVEPTYLHQGKLLSAVEAAAAGLKRRAPPQIRLEQ
VREISQFVSRPALESLRSVVVLEAAETMAEGAANGLLKTLEEPGKSVLILIAPSVDSLLS
TLVSRCAKIPFFRLSNTDIIQILNQTGYGEICRHPDIIAMAQGSPGQAIACWEQLQTISP
ELLAKVKKPPQSLRESLELAAEISRSLDTQAQLWLVDYLQHSYWEQYHNHGVNGNNSLPP
IPGLLHQLEQAKKHLLAYVQPRLVWECTLMAIANI
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggatgcctttagcgatttaattggacaggctcaagctgtcgaacttctcagccgagta
attgcccaaaatcggatcgctccggcttatttattcgtcggaatacccggagtaggtcgt
agtttagcagctcgattttttatcgaattattattacagccgactcgcaaaaatctcgta
aattcatccgaggaggacgcacataaacaatctattaaacatcgagttgagatgagaaat
catcctgatttactttgggtagaacccacctatttgcaccaaggaaaattgctctcagca
gtcgaagccgccgccgctggtctcaaacgtcgcgcaccgccacaaattcgcctggaacag
gtgcgagaaattagtcagtttgtcagccgtccggctttggagtctctgcggtctgtcgtg
gttttagaggcggcggaaactatggctgagggagcggctaatggtttattaaaaacccta
gaagaaccgggtaaatccgtgttaattttaattgctcccagcgtagattctttgctatca
accttggtctctcgctgtgcaaaaatccccttttttcggctatcaaatactgatataatt
cagatattaaatcaaaccggctatggtgaaatttgccgtcatcctgacatcatagcaatg
gcccaagggagtcccggacaagcgatcgcctgttgggaacaattacaaactatttcaccc
gaactattagccaaagtcaaaaaacctccccaaagtttacgagaatctctcgaattagca
gcagaaattagccgttctcttgatactcaggctcagttatggttagtggattatctgcaa
cattcctattgggaacaataccataatcatggggttaatggtaacaatagcttaccgcca
attcccggattacttcaccagttagaacaagctaaaaaacatctgctggcttacgttcaa
cctcggttagtctgggagtgtaccctaatggcgatcgccaatatttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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