KEGG   Aeromonas rivipollensis: C7N77_14465
Entry
C7N77_14465       CDS       T05453                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
arv  Aeromonas rivipollensis
Brite
KEGG Orthology (KO) [BR:arv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:arv03016]
    C7N77_14465 (rnd)
Enzymes [BR:arv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     C7N77_14465 (rnd)
Transfer RNA biogenesis [BR:arv03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    C7N77_14465 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNAseD_HRDC_C HRDC DNA_pol_A_exoN
Other DBs
NCBI-ProteinID: AVP94263
Position
complement(3122602..3123714)
AA seq 370 aa
MQYQLISQQAELEQYLASLADVPLAIDTEFVRTRTYYPQLGLFQIYDGERLALLDPLTLD
LSGLWQRLGRAGQIAILHASGEDLELIQHQAGHLPNQMHDTQLATAFLGYGVSVGFGALV
KEFLGVELEKDQARTDWLARPLTARQLEYAAADVFYLMPLYEKVMARLHESGKFAWFEQE
CQNHSARKTQGSDPRQAYLEIINAWQLGRRELAILRELAAWRQQEAVRRDLALNFVVKEL
HLFKVAERRPTSLRDLNELGLAPIEIKIHGKRMLDIVAAAQQSDPEGWPEPIRRLVDYPQ
YKAELKRIKAMVEEKAKASNIPPELVASKKIIHQYFTWSWRMSAEERARADKPMLLQGWR
HELVGHLLAQ
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgcaatatcaactcatttcacagcaagccgaactggagcagtatctcgcttccctggcc
gacgttcccctggccatagataccgaattcgttcgcacccgtacctactatccccagctc
ggtctgttccagatctatgacggcgaacgcctcgccctgctggatcccctgaccctggat
ctctcggggctgtggcagcggctcgggcgggcagggcagatcgccatactgcacgcctcg
ggtgaagatctggagctcattcagcatcaggcgggccacctgcccaaccagatgcacgac
acccagctcgcgacggcatttctgggttacggcgtatcggtcggcttcggcgccctggtc
aaggagttcctcggcgtggagctggaaaaggatcaggcccgcaccgactggctggcccgt
cccctgaccgcgcgccagctcgagtatgcggcggcggatgtcttctacctgatgcccctc
tacgagaaggtgatggccaggctgcacgagagcggcaagtttgcctggttcgagcaggag
tgccagaaccactccgcccgcaagacccagggcagcgatccccgtcaggcctacctcgag
atcatcaacgcctggcaactgggtcggcgcgagctggccattctgcgcgagctcgccgcc
tggcgtcagcaagaggcggtgcgccgggatctggctctcaacttcgtggtcaaggagttg
cacctgttcaaggtggcggagcgtcggcccacttcattacgggatctcaacgagctgggg
ctggcccccatcgagatcaagatccacggcaagcggatgctggacatagtcgcggcggcc
cagcagagcgaccccgaaggttggcccgagcccattcgtcgactggtggattacccccag
tacaaggccgagctcaaacgcatcaaggccatggtggaagagaaggccaaggccagcaac
atcccgcctgagctggtggccagcaagaagatcatccaccagtacttcacctggagctgg
cggatgagcgccgaggagcgcgcccgcgccgacaagcccatgctgctgcaaggctggcgt
catgagctggtggggcatctgctggcccagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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