KEGG   Aeromonas rivipollensis: C7N77_19700
Entry
C7N77_19700       CDS       T05453                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
arv  Aeromonas rivipollensis
Pathway
arv03410  Base excision repair
arv03430  Mismatch repair
arv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:arv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    C7N77_19700
   03430 Mismatch repair
    C7N77_19700
   03440 Homologous recombination
    C7N77_19700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:arv03400]
    C7N77_19700
DNA repair and recombination proteins [BR:arv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     C7N77_19700
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     C7N77_19700
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      C7N77_19700
SSDB
Motif
Pfam: DHHA1 RecJ_OB DHH
Other DBs
NCBI-ProteinID: AVP95176
Position
complement(4263129..4264859)
AA seq 576 aa
MPLQIRRRPRVDDSHLPATLHPLLRQIFASRGVEDPALLERSANQLLPPQRLFGMEQAVP
LLADALTAQQRILIVGDFDCDGATSSALCVLALRAMGGHHVDFLVPNRFEFGYGLTPEIV
ELAVARGAEFLITVDNGISSIAGVAAAKAAGMRVLVTDHHLPGQDLPDADAIVNPNQRGC
DFPSKSLAGVGVAFYLMAALNTHLRQSGWYERQGIRAPNVADYLDLVALGTVADVVALDG
NNRILVHQGLQRIRAGRCRPGIQALVDVSGRDGRRLCAADLGFALGPRLNAVGRLDDMSL
GVACLLSDDLNLARQLAAEMDSLNQERKEIEQGMQQEALATLEQIRFRDGEVPSGIVLHR
DEWHQGVVGLVASKVKEKYYRPVIAFAQSSDTELKGSGRSIPGVHLRDALELLDTRHPGL
MGKFGGHAMAAGLTLPKANIAAFGRAFEAVIAELVTPELLTGVLLTDGELLPDELSLELA
ELIRASGPWGQAFPEPLFDGEFVLVQQRLVGEKHLKMMLTTDSGHAVDAIAFGVDLKRWP
DASVKRVRLVYRLDVNEWRGNRSVQLLVEHLEAAGL
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgcccctgcaaatccgtcgtcgtccgcgagttgatgattcccatctgcccgccaccctg
catcccctgcttcgtcaaatcttcgccagtcgcggcgtggaggatcccgccctgctggag
cgcagcgccaaccagctgctgccgccccagcgcctgttcggcatggagcaggcggtgccc
ctgctggcggatgccctgacggcgcagcagcgcatcctcatcgtcggcgacttcgactgc
gacggcgccaccagctcagccctgtgcgtgctggccctgcgggcaatggggggccatcac
gtcgattttctggtgcccaaccgcttcgagttcggctacggcctcacccccgaaatcgtc
gagctggcggtggcccggggcgccgagtttctgatcactgtggataacggcatctccagc
attgccggggtggcggcggccaaggcggccgggatgcgggtactggttaccgatcaccac
ttgccgggccaggatctgcccgacgccgatgcgatagtgaaccctaaccagcgtggctgc
gatttcccctccaagtccctggccggggtcggggtggccttctatctgatggcggccctc
aacacccatctgcgccagagcggctggtatgaacgccagggcattcgcgcccccaatgtg
gcggactatctcgatctggtggccctcggcacagttgccgacgtggtggcgctggatggc
aacaaccgtatcctggtccatcaggggctgcagcggatccgggccggtcgctgccgcccc
ggcatccaggcgctggtggacgtgtcgggccgcgatggccgccgcctgtgcgccgccgat
ctcggctttgccctggggccccgcctcaatgcggtgggccgtctcgatgacatgtccctc
ggggtcgcttgtctgctgagcgatgatctcaacctagcgcgccagcttgcggccgagatg
gacagcctcaaccaggagcgcaaggagatagagcaggggatgcagcaggaggccctcgcc
accctggagcagatccggtttcgcgatggcgaggtgccaagcggcatagtgctgcacaga
gacgagtggcatcagggggtggtggggctggtggcctccaaggtgaaggagaagtactac
agacccgtgattgcgtttgcgcagagcagcgacaccgagctcaagggctcgggccgctcc
attcccggggtgcacctgcgcgatgccctcgagctgctcgatacccgccatccgggcctg
atgggcaagtttggcggccacgccatggcggcggggctgaccctgcccaaggccaatata
gcggcgttcggccgggcgtttgaggcggtcatcgccgagctggtgaccccggagctgctg
accggggtactgctcaccgacggcgagttgctgccggacgagctgagtctggagctggca
gagctcatccgcgcctccggcccctggggccaggccttccccgagccactgttcgatggc
gagttcgtgctggtgcagcagcggctggtgggggagaaacacctcaagatgatgctgacc
acggattccggtcacgcggtggatgccatcgccttcggggtggatctcaagcgctggccg
gatgcctcggtgaaacgggtgcggctggtctaccggctcgacgtcaacgagtggcgcggc
aaccgcagcgtccagctgctggtggagcatctggaggccgccggtctctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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