KEGG   Aeromonas salmonicida subsp. salmonicida A449: ASA_0002
Entry
ASA_0002          CDS       T00500                                 
Symbol
dnaN
Name
(GenBank) DNA polymerase III beta-subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
asa  Aeromonas salmonicida subsp. salmonicida A449
Pathway
asa03030  DNA replication
asa03430  Mismatch repair
asa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:asa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ASA_0002 (dnaN)
   03430 Mismatch repair
    ASA_0002 (dnaN)
   03440 Homologous recombination
    ASA_0002 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:asa03032]
    ASA_0002 (dnaN)
   03400 DNA repair and recombination proteins [BR:asa03400]
    ASA_0002 (dnaN)
Enzymes [BR:asa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ASA_0002 (dnaN)
DNA replication proteins [BR:asa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ASA_0002 (dnaN)
DNA repair and recombination proteins [BR:asa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ASA_0002 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_3 DNA_pol3_beta_2 SLS
Other DBs
NCBI-ProteinID: ABO88219
UniProt: A4SH47
Position
1654..2757
AA seq 367 aa
MQLEISREALLRPLQLVSGALGGRPTLPILGNVLLDVSQGLLSLTGTDLEVEMIGQVYLN
NESQDGRTTVPARKLLDICRGLPEGADIRLNTEGERLIIRSGRSRFNLSTLPASEYPNIE
DWESVLEFDIGQLELKKLIDATQFSMASQDVRYYLNGMLFESEGHGLRTVATDGHRLATC
RREVVEESLPDHQVILPRKGVLELVRLLEAEDKPVRLQIGRSNLRAALDGFIFTSKLVDG
RFPDWRRVIPRNSDKALIAGREDLRQAFARAAILSNEKFRGVRLNLQENLLRITANNPEQ
EEAEELLDVQYEASEMEIGFNVSYVLDVLNTLKCDQIRISLSDSISSAIIEDFDHQDAQY
VVMPMRI
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgcagctcgaaattagccgtgaggccctgttacgtcctctgcaactggtgtccggtgcc
ctgggtggccggccgaccctgccgatcctcggcaatgtcctgcttgatgtcagccagggt
ctgctgtcgctgaccgggactgacctggaagtcgagatgataggtcaggtctatctcaat
aatgagagccaggatggccgcaccactgtgccggcgcgcaagctgctggatatctgccgc
ggcctgccggaaggcgcggacattcgcctcaacaccgaaggcgagcgcctgatcatccgt
tccggtcgttcccgtttcaacctgtcgaccctgcctgccagtgaatatccgaatatcgag
gattgggaatccgtgctcgaattcgacattggccagctggagttgaagaagctgatcgat
gcgacccagttctccatggcgagccaggacgtgcgttactacttgaacggcatgctgttc
gagagcgagggccacggcctgcgtaccgtggcgaccgacggccaccgtctggccacctgt
cgtcgcgaggtagtggaagaatcgctgcccgatcatcaggttatcctgccccgtaaaggt
gtgcttgagctggtgcgcttgctggaagcggaagacaagccggtaaggctgcagattggt
cgcagcaacctgcgcgccgcgctggacggcttcatcttcacctccaagctggtggatggc
cgctttccggattggcgtcgggttattccgcgcaacagcgacaaggccctgatcgccggt
cgtgaggatctgcgtcaggcatttgcccgcgccgctatcctctccaacgagaaattccgt
ggggtgcgtctcaatctgcaggaaaacctgctgcgcattaccgccaacaacccggaacag
gaagaagccgaagagctgcttgacgtacaatacgaagccagcgagatggagatcggcttt
aacgtctcttatgtgctggacgtgctgaatacgttaaaatgtgaccaaattcggattagc
ctgagcgattccatcagcagtgccattattgaggattttgatcatcaggatgctcagtac
gtggtgatgccgatgcggatctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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