KEGG   Aeromonas salmonicida subsp. salmonicida A449: ASA_1769
Entry
ASA_1769          CDS       T00500                                 
Symbol
ihfB
Name
(GenBank) integration host factor beta-subunit
  KO
K05788  integration host factor subunit beta
Organism
asa  Aeromonas salmonicida subsp. salmonicida A449
Brite
KEGG Orthology (KO) [BR:asa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:asa03032]
    ASA_1769 (ihfB)
   03036 Chromosome and associated proteins [BR:asa03036]
    ASA_1769 (ihfB)
   03400 DNA repair and recombination proteins [BR:asa03400]
    ASA_1769 (ihfB)
DNA replication proteins [BR:asa03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    ASA_1769 (ihfB)
Chromosome and associated proteins [BR:asa03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    ASA_1769 (ihfB)
DNA repair and recombination proteins [BR:asa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      ASA_1769 (ihfB)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-DNA_bdg HU-CCDC81_euk_1 CATASP
Other DBs
NCBI-ProteinID: ABO89848
UniProt: A4SLS6
Position
1853879..1854163
AA seq 94 aa
MTKSDLIEQLAASRMHMPAKDVEAAIKEILEQMASTLQNGDRIEIRGFGSFSLHYRAPRV
GRNPKTGDKVELTGKYVPHFKPGKELRERVNIIE
NT seq 285 nt   +upstreamnt  +downstreamnt
atgaccaaatcagatctcatcgaacaattggctgcgagccgcatgcatatgccggccaaa
gatgtcgaagctgccatcaaggagatccttgagcagatggcatcgactttgcaaaacggc
gaccggattgaaatccgtggatttggaagtttttcactgcactatcgtgccccccgcgtg
ggtcgtaatcccaagaccggggacaaggttgaactgaccgggaaatatgtccctcatttc
aaacctggcaaagagttgcgcgagcgcgtgaacattattgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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