KEGG   Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_0043
Entry
RATSFB_0043       CDS       T01624                                 
Name
(GenBank) putative peptidase M15D vanX D-ala-D-ala dipeptidase
  KO
K08641  zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
Organism
asb  Candidatus Arthromitus sp. SFB-rat-Yit
Pathway
asb01502  Vancomycin resistance
asb02020  Two-component system
Brite
KEGG Orthology (KO) [BR:asb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RATSFB_0043
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    RATSFB_0043
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:asb01002]
    RATSFB_0043
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:asb01011]
    RATSFB_0043
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:asb01504]
    RATSFB_0043
Enzymes [BR:asb01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.13  Dipeptidases
    3.4.13.22  D-Ala-D-Ala dipeptidase
     RATSFB_0043
Peptidases and inhibitors [BR:asb01002]
 Metallo peptidases
  Family M15: zinc D-Ala-D-Ala carboxypeptidase family
   RATSFB_0043
Peptidoglycan biosynthesis and degradation proteins [BR:asb01011]
 Peptidoglycan biosynthesis and degradation
  Carboxypeptidase
   RATSFB_0043
Antimicrobial resistance genes [BR:asb01504]
 Gene sets
  Vancomycin resistance modules
   Vancomycin resistance, D-Ala-D-Lac type [MD:M00651]
    RATSFB_0043
SSDB
Motif
Pfam: Peptidase_M15 VanY Peptidase_M15_4
Other DBs
NCBI-ProteinID: BAK80605
UniProt: G2IFM7
Position
complement(62037..62774)
AA seq 245 aa
MSILILSFSILLIGGGLYYTYDSLTQIDKKITINNFKNTTESLYNFDVSINGLKLLNSFH
HDMSLDIRYASKNNFTHTVLYDADACILQENTLKKLLNAQEEFKSLGYKIKIWDAYRPFY
IQKILWDIVPNSNYIANPYTGGSNHNRACAVDITLTDLNDIEINMPTGFDEFSDRAHRSY
IGASEIQIKNAELLKNIMIKHGFKPIYTEWWHFDDANYSNYPIINISINEYLQIINTKMK
GGELQ
NT seq 738 nt   +upstreamnt  +downstreamnt
atgtctatacttatactatcatttagtattctccttataggaggaggactttattacaca
tatgattcattaacgcaaattgataaaaagattacaattaataattttaaaaatacaaca
gaatctttatataattttgatgtatctataaatggtcttaagctattgaattcatttcat
catgacatgagtttagatattagatatgcctctaaaaataattttacacatacagtactt
tatgatgctgatgcatgtatactacaagaaaatactcttaaaaaattattaaatgctcaa
gaggaattcaaatcacttggatacaaaataaaaatatgggatgcatatagacccttttat
atacaaaaaatattatgggatatagttccaaatagtaactatatagctaatccctatact
ggtggatctaatcataatagagcatgtgctgttgatattacactgactgatttaaacgat
atagaaataaatatgcctactggttttgacgaattttcagatagagctcacaggagttac
ataggtgcatctgaaatacaaataaagaatgcagaactcctaaaaaacataatgataaaa
catggttttaaaccaatatatactgaatggtggcattttgatgatgctaattattctaat
tatcctataattaatatcagcataaatgaatatcttcaaattataaatactaaaatgaag
ggaggtgaattgcaatga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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