KEGG   Aggregatibacter segnis: NCTC10977_00428
Entry
NCTC10977_00428   CDS       T06075                                 
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
aseg  Aggregatibacter segnis
Brite
KEGG Orthology (KO) [BR:aseg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:aseg03016]
    NCTC10977_00428 (truD)
Enzymes [BR:aseg01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     NCTC10977_00428 (truD)
Transfer RNA biogenesis [BR:aseg03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    NCTC10977_00428 (truD)
 Prokaryotic type
    NCTC10977_00428 (truD)
SSDB
Motif
Pfam: TruD Tas3_C-hel
Other DBs
NCBI-ProteinID: SQH63927
Position
1:419551..420561
AA seq 336 aa
MMDLAYLQKTPPKQTALLKAEYADFVVKEQLGYDMSGDGEFVAVKVRKTDCNTLFVGEQL
AKFAGISARNMSYAGLKDRKAVTEQWFSLQMPGQPTPDFNQFSLEGVEILDVTRHQRKIR
IGSLQGNHFEILLRNTEETDELKVRLDFLAKNGFPNYFTEQRFGRDGNNLAQALRWANGE
INVKDRNKRSFYLSAARSEIFNLIVSKRMELDLAQQILVGDVLQLNGSHSWFVVNESEDL
AQLQQRLAQQDVLLTAPLIGEEEKSAVDFEHEIFAQHQALFALMRQERMKAARRPILMQP
QQFQWQFEPNGLRLQFDLPAGSYATALIRELVNVEN
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgatggatttagcctatttgcaaaaaacaccgccaaaacagaccgcacttttaaaagcg
gaatatgcggattttgtggtgaaagaacagctcggctacgacatgagtggcgatggtgaa
tttgttgccgtgaaagtgcgcaaaaccgattgcaacaccttgtttgtaggcgagcaactg
gcaaaattcgccggcatttctgcgcgcaacatgagctacgccggtttgaaagatcgcaaa
gccgttaccgagcaatggttcagtctgcaaatgcccggacaaccgacaccggatttcaat
caattttctctcgaaggggtagaaattctcgacgtcacccgccaccaacgcaaaattcgt
atcggcagcttacaaggcaatcattttgagattttgctccgcaacactgaagaaaccgac
gaactcaaagtgcggttagattttctggcaaaaaacggcttcccaaattatttcaccgaa
caacgttttggccgtgatggcaataacttagcgcaggcgttacgctgggcaaacggcgaa
attaacgtcaaagatcgcaataagcgtagcttctatctttctgctgcgcgtagcgaaatt
tttaatttaatcgtgtccaaacggatggaattagacttggcacagcagattttggtcggc
gatgttttacaactgaacggttcgcacagctggtttgtggtgaacgagtcggaagatttg
gcgcagctgcaacagcgtttggcacaacaagatgttttactcacagcgccacttatcggc
gaagaagagaaaagtgcggtcgattttgaacatgaaattttcgcacaacatcaggcgtta
ttcgcgttaatgcgccaagaacgtatgaaagcggcacgccgcccaatattaatgcagcca
cagcaattccaatggcaatttgaaccaaacggcttgcgccttcaatttgacttaccggcg
ggcagttatgccactgcgctcattcgcgaattggtcaatgtcgaaaattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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