KEGG   Candidatus Arthromitus sp. SFB-mouse-Japan: SFBM_0071
Entry
SFBM_0071         CDS       T01591                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
asf  Candidatus Arthromitus sp. SFB-mouse-Japan
Pathway
asf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:asf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SFBM_0071 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:asf03400]
    SFBM_0071 (uvrB)
DNA repair and recombination proteins [BR:asf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SFBM_0071 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SFBM_0071 (uvrB)
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD AAA_30 Kinesin Microtub_bd AAA_22 AAA_16 SWI2_SNF2 DUF87
Other DBs
NCBI-ProteinID: BAK55853
UniProt: F9VI95
Position
87470..89452
AA seq 660 aa
MKDFKINSKLKPMGDQPKAIDELVNSINSGNKYQTLLGVTGSGKTFTMANVIERLQRPAL
VLAHNKILAAQLCSEFREFFPDNSVEYFVSYYDYYQPEAYVPQTDTLIEKDASINQEIDK
LRHSATSSLVERRDTIVVASVSCIYGLGNPIEYKKLVVNLRVGMIRDRDDVVRQLVEIQY
ERNEIDFARGTFRVKGDVLDIVPASSFSVGIRVEFFGDEIEKISEFDVLTGKVFSKLAHI
SIYPATHFATSKGVIEEAISEINLELEERIRYFKENDKLLEAQRIKERVNYDIEMMREIG
YCSGIENYSRILDGREKGSKPYTLFDYFPSDYLLFIDESHVTIPQVRAMYAGDRSRKESL
VNYGFRLPCAYDNRPLKFEEFEEKINQVVFVSATPSDYEKEHQEFIVNQIIRPTGLLDPL
VEVRPIENQIDDLYEEVIKTIEKGFRVLVTTLTKKMAEHLTDYLNDLNIKTTYMHSDVKT
IDRMEIIKSLRSGEFDVLVGINLLREGLDIPEVSLVCILDADKEGFLRSETSLIQTIGRA
ARNAESKVILYGDVITKSMKMAIDETKRRRAIQMEHNKKYGITPKTVIKGIREVIQATKI
SNDEVSKKKVNINIPKDFDECMKRIGMLEKEMKKCAKELDFERAMELRDEIKEIKKIIFI
NT seq 1983 nt   +upstreamnt  +downstreamnt
atgaaagattttaagataaattcaaagttaaaacccatgggagatcagcctaaagctata
gatgaacttgtaaattctattaatagtggtaataaataccaaactcttttgggtgttact
ggatctggaaagacttttactatggcaaatgttatagagaggttacagagaccagcttta
gtattggctcataataaaatattagcagcacaattatgttcggagtttagagagtttttt
ccagataattctgttgagtattttgtgtcttattatgattattatcagccagaggcctat
gttcctcaaacggatacattaatagaaaaggatgcatctattaatcaggagatagataaa
ttaaggcactctgcaacatcttctttagttgaaagaagagataccatagttgtggcttct
gtatcttgcatatatggtttaggaaatcctatagagtataagaagcttgtagtaaatcta
agagttggtatgattcgtgatagggatgacgttgtaaggcaacttgttgagatacagtat
gagagaaatgagatagattttgctagagggacatttagggttaagggtgatgttcttgat
attgtcccagcatcttctttcagtgttggaattagggttgaattttttggagatgagata
gagaaaataagtgaatttgatgttttgacaggaaaagtattttctaaattagctcatatt
tctatatatccagctactcattttgctacatctaaaggagtgattgaagaagctataagt
gagataaatttggaacttgaagagagaattaggtattttaaagaaaatgataaactcttg
gaagcccagaggattaaagagagagttaattatgatattgagatgatgagagaaatcggg
tattgcagtggtattgagaattattctagaattttagatggaagagagaaggggagcaaa
ccttatactttgtttgattattttccgtctgattatttgttgtttatagatgagtctcat
gttactataccacaagttagagcaatgtatgcgggagatagatcgagaaaggagtccctt
gttaattatggatttagacttccttgtgcttatgataatcgtcctcttaaatttgaagaa
tttgaggaaaagataaatcaagtagtttttgtgtctgcaacaccatcagattatgaaaaa
gagcatcaagaatttatagtaaatcaaattataagaccaacgggacttttagatcccttg
gttgaggttagacccattgaaaatcagatagatgatttatatgaggaagttataaaaacg
atagaaaagggatttagagttttagttacaactctcacaaaaaagatggcagagcattta
actgattatttaaatgatttaaacattaaaactacatatatgcattctgatgtaaagact
atagatagaatggagataataaaatctttaagaagtggggaatttgatgttttagttggt
ataaatttattgagagagggacttgatatacctgaagtatctcttgtgtgtattcttgat
gctgataaagagggatttttaagatctgaaacaagtcttatccaaacgataggaagagct
gcaagaaatgcagagagtaaggttatattgtatggtgatgttataactaagtccatgaaa
atggcaattgatgaaacaaagagaagaagagcaatacaaatggaacacaataagaagtat
ggaataactcctaaaactgttataaaaggtatcagagaagtaatacaagcaacgaagata
tcaaatgatgaagttagtaagaagaaggttaatattaatattccaaaagattttgatgag
tgtatgaagcgtattggtatgcttgagaaagaaatgaagaaatgtgcgaaagaacttgat
tttgagcgtgctatggaattgagagatgagataaaagaaattaagaagattatatttatt
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (27)   

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