KEGG   Candidatus Arthromitus sp. SFB-mouse-Japan: SFBM_1131
Entry
SFBM_1131         CDS       T01591                                 
Name
(GenBank) exonuclease
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
asf  Candidatus Arthromitus sp. SFB-mouse-Japan
Brite
KEGG Orthology (KO) [BR:asf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:asf03400]
    SFBM_1131
DNA repair and recombination proteins [BR:asf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SFBM_1131
    Archaeal homologous recombinant proteins
     SFBM_1131
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_29 SMC_N AAA_27 PhoH AAA_16 AAA_22 ABC_tran
Other DBs
NCBI-ProteinID: BAK56894
UniProt: F9VL86
Position
complement(1216686..1219766)
AA seq 1026 aa
MIPIKLTVQAFGPYKGKETIDFRKFFDNRLFLITGNTGSGKTMIFDAICYALFGDVSGQY
REIDTLRSQFASREDITYVKFEFSHRNKDYIITRSPEQFKISRGKEILQRAKAEILIGNE
VVSGIKNVNQEIKNILGIDHSQFKQIVMIAQGEFRDLVSADSRNRESIYRKIFNTMEFEN
IQNTLKERASEYEKKFDNFDQRIRGLLDSINSIKLISYEDLTINQVLDVLSKEVEIYDNK
LKELKPKKEYYKNEILRNNNFFDSFNSLIARKNELSSFDISSLKDEGNFLDKVKKTFLIR
DKEKVLENFKDTRDGYEKEIEKIIFDLNFHKNNLDVLNKEFEETKSYDIEIENLKSKIID
LESLKNTVEEKQKHEFKIKDLEKELLDLDDNKESIKKELEIFDRRYNQILSFSIEHKDIK
EKILYIESDLLNLEGIKEGLLKYESELKIYEKLNIECEKCESKYNKIFDLYGNKTRELSL
SEDIYFRNQAGFLANKLEDGCPCIVCGSTIHPNKANLVDVSVNEESLKELRNEILMIKKE
LEETVTLKINLNKDVKSKEDRIREIYEDVLKKDKTDEFISFKEFELCEDTISRVKLKVLS
LRNSLNNSRDINNKLVELQEEITNIESKIKEGKLNFDQIEKDYIQKQSNISALKIILNDK
TSRLLKYNISSINDYLDTLEQTNNYLKSLINKREVINSNITKCNNEILKFQSKFDIKNRD
IEDLNFRIKTSYEIFMESLKENGFKDIDEYKKFKISESEFNERTKFIEDKREEFRNINLK
IIQLEKDISSSPYKTKEELSTHLKDLNDKLKEVEELEIKYCQNKSLLENVYGSILSINKD
ISNFENLRINLNELNKIANGINKYKISFERYILGIYFKEIIYTANIRLLKLTNGRFLFRH
LKENTDMRSQQGLEISVFDNRTSQERKVNAISGGESFQASLALALGLSDVIQRYSGGVSI
DTLFIDEGFGSLDSDSLQNALECLIEANDESKLIGIISHVQELKDFIRSKIEVIDSSNGS
RIKTDL
NT seq 3081 nt   +upstreamnt  +downstreamnt
atgattccaataaagttaactgtacaagcatttggaccatataaaggaaaagaaacaata
gattttaggaaattttttgataataggttatttttgattactgggaatacaggtagtggg
aaaactatgatatttgatgcaatatgctatgctttattcggagatgtaagtggtcaatat
agagagattgatacactaagaagccaatttgcgagtagagaggatattacatatgttaag
tttgaattttctcatagaaataaagattatataataacgagatcacctgaacaatttaaa
atttcacgaggaaaagagattttacaaagagctaaggcagaaattttaataggtaatgaa
gtagtaagtgggattaagaatgttaatcaagaaatcaaaaatattttaggtattgatcat
tcacaatttaaacaaattgttatgattgctcaaggtgaatttagagaccttgtatctgca
gattcgaggaatagggaaagtatatacagaaagatatttaatacgatggagtttgaaaat
attcaaaatactttaaaagagagagcatctgaatatgaaaaaaagtttgataattttgat
caaaggataagaggacttttggattcaatcaattctataaaattaatatcttatgaagat
ttaacaataaatcaggtattagacgttttaagtaaagaagtagaaatttatgacaataaa
ttaaaggaattaaaacctaagaaagaatattacaaaaatgaaattttacgtaataataat
ttttttgatagttttaattctttgatagctagaaaaaatgagttatcatcatttgatatt
agttcattaaaggatgagggaaattttttagataaggttaaaaaaacatttttaataaga
gataaagagaaagttttagaaaattttaaagatacacgagacggatatgaaaaagagatt
gagaaaataatttttgatctcaatttccataaaaataatctagatgttttaaataaagag
tttgaagaaactaaatcttatgatattgagattgaaaatcttaaaagtaaaataatagat
cttgaatctttaaagaatactgtagaagagaaacaaaaacatgaatttaaaattaaagat
ttagagaaagaattgttagatcttgatgataacaaggaatctataaaaaaagaattagaa
atatttgatcgtaggtataatcaaattttaagttttagtatagagcataaggatataaaa
gagaaaattttatacatagaaagtgatttattaaatttagaaggaattaaagaaggactt
cttaagtatgagagtgaacttaagatttatgaaaaattgaatattgaatgtgaaaaatgt
gaaagtaagtataataagatttttgacttatatggaaataagacaagagaactttcatta
agcgaagatatttattttagaaatcaggctggattccttgcgaataaacttgaagatgga
tgtccttgtattgtttgtggatcaacgattcatcctaataaagcaaatctcgttgatgtc
agcgtaaatgaagaatcattgaaagaattaaggaatgaaattttaatgataaaaaaagaa
cttgaggagacagtaactctaaaaatcaacttaaacaaggatgttaaatctaaagaagat
aggataagagaaatatatgaggacgttttaaagaaggataaaactgatgagtttataagt
ttcaaagagtttgaattatgtgaggatactatatcaagagttaagttaaaagtgctttca
ttgagaaattcactgaataatagtagagatataaataataagttagttgaacttcaagaa
gaaattacaaatatagaaagtaaaatcaaagagggaaaattaaattttgatcagattgaa
aaagattatatacaaaagcagagtaatatatcagcactaaaaataattttaaatgataaa
acatcaagattattgaagtataatatttcatcaataaatgattatctagatacattagaa
caaacaaacaactatttgaaaagtttaataaacaagagggaagtcataaattcaaatata
actaaatgtaataatgagatattaaaatttcaatctaaatttgatataaagaacagagac
atagaagatttaaattttagaattaagacaagttatgaaatatttatggagtcacttaaa
gaaaatggatttaaggatatagatgaatataaaaaatttaagatatcagagagtgaattt
aatgagagaactaaatttatagaagataaaagagaagagtttagaaatattaatttaaaa
ataatacaactagagaaagacatatcatcttcaccatataaaactaaagaagagttatca
acacatttaaaagatttgaatgataaattaaaagaagttgaggaattggagataaaatat
tgtcagaataaatctttacttgaaaatgtatatggaagcattttatcaataaataaagat
atatcaaattttgaaaatttaaggataaatttaaacgagttaaacaaaattgcaaatgga
attaataaatataaaattagttttgagagatacatactgggtatttatttcaaagagata
atatataccgctaatattagacttttaaaattaacaaatggaagatttttatttagacat
ttaaaagagaatacagatatgagatctcaacagggtttagagataagtgtatttgataat
aggacatctcaagagaggaaagttaatgcaatttctgggggagaaagttttcaagcatca
cttgctttggctttaggattatcagatgttatacaaagatattcgggaggagtttcaata
gatactttatttattgatgagggatttggatctttagattctgattcactacaaaatgct
cttgagtgtttaatcgaagctaatgatgagtcaaaacttattggaataatttcacacgtt
caggaactaaaagattttataagatctaaaatagaagtgatagattcaagcaatggtagt
agaataaaaacggatctatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (103)   
   KEGG ORTHOLOGY (1)   
   RefGene (100)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (116)   

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