KEGG   Candidatus Arthromitus sp. SFB-mouse-Japan: SFBM_1364
Entry
SFBM_1364         CDS       T01591                                 
Name
(GenBank) tRNA pseudouridine synthase
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
asf  Candidatus Arthromitus sp. SFB-mouse-Japan
Brite
KEGG Orthology (KO) [BR:asf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:asf03016]
    SFBM_1364
Enzymes [BR:asf01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     SFBM_1364
Transfer RNA biogenesis [BR:asf03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    SFBM_1364
 Prokaryotic type
    SFBM_1364
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344
Other DBs
NCBI-ProteinID: BAK57123
UniProt: F9VLW5
Position
complement(1485142..1485882)
AA seq 246 aa
MNICFKICYLGSNYHGFQKQKEKISIQGVIEDVFYKIFKIKVNIIGCSRTDAGVHAKEFY
FNIHLDNFRVSCVNIKNALNTYLPYDIRILDVFYVDEKFHSRYDALKKEYEYKIFNGDVM
DPFKYQYYMHFRYELDFNSMYKACKYFEGEHDFRAFMSSNSSIKNTIRIIFKSSIYKEDN
IIIYNILGNGFLYNMVRIIVGTLIMVGQGKIESQDIQHIIKSRNRNKAGFVSEAKGLCLK
KVFYEN
NT seq 741 nt   +upstreamnt  +downstreamnt
ttgaatatttgttttaaaatatgttatttaggatcaaattatcatggattccaaaaacag
aaggaaaaaataagtatacagggtgttatagaggatgttttttacaaaatatttaaaata
aaagtaaatattataggatgtagtagaactgatgctggtgttcatgctaaagaattttat
tttaatattcatttagataattttagagtgtcatgtgtaaatataaagaatgcattaaat
acttatttaccttatgatataagaattttagatgtattttatgtggatgaaaagtttcat
tcgagatatgatgccttgaaaaaagaatatgaatataagatatttaacggagatgttatg
gatccttttaaatatcaatattatatgcattttagatatgaattagattttaattctatg
tataaggcatgtaagtattttgaaggtgaacatgattttagggcatttatgagtagtaat
tcttcaataaaaaatacgattagaataatttttaaaagtagtatttataaggaagataat
attataatttacaatattttaggaaatggttttttatataatatggttagaataattgta
ggtactttgataatggtaggtcagggtaaaattgagtctcaagatattcaacatataata
aaatctaggaataggaataaagcaggttttgttagcgaagcaaagggtttatgcttaaaa
aaagttttttatgagaattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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