KEGG   Candidatus Arthromitus sp. SFB-mouse-Japan: SFBM_1369
Entry
SFBM_1369         CDS       T01591                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
asf  Candidatus Arthromitus sp. SFB-mouse-Japan
Pathway
asf03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:asf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SFBM_1369
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:asf03021]
    SFBM_1369
   03400 DNA repair and recombination proteins [BR:asf03400]
    SFBM_1369
Enzymes [BR:asf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SFBM_1369
Transcription machinery [BR:asf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SFBM_1369
DNA repair and recombination proteins [BR:asf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SFBM_1369
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 PASTA RAD51D_N Cytomega_gL
Other DBs
NCBI-ProteinID: BAK57128
UniProt: F9VLX0
Position
complement(1488815..1489759)
AA seq 314 aa
MFDIETPKIECIESNEQGTYGKYVIDPLERGYGTTLGNSLRRILLSSLPGVATTSIKINE
VLHEFSTIKGIKEDVTEIILNIKQLALRMEEEGSKVLHLDIKGSKEVTAADIIEEEGIEI
INKDLHIATLEDDGHLNMEITVNRGRGYVPQNKNKIDGNIGYIPIDSIYTPVKRVNFTVE
NTRVGQVTDYDKLTIEVWTNGSIKVDEAISYSAKILIEHFKLFLGLTKEANEVVVMVQKE
EDKKEKVLEMTIEELDFSVRSYNCLKRAGINTVQELAQKSLEDMMKVRNLGKKSLEEVEK
KLKDLGLSLKQSDE
NT seq 945 nt   +upstreamnt  +downstreamnt
atgtttgatattgaaacacctaagattgaatgtatagaatctaatgaacaagggacatat
gggaaatatgttatagatcctcttgaaagagggtatggaacaactcttggcaattcatta
agaagaattttgctatcatcactacctggtgtagctactacttctataaaaattaacgaa
gtattacatgaattttctacaattaagggtataaaagaagatgtaacagaaattattttg
aatattaagcaacttgctttaaggatggaagaagaaggaagtaaagtattacatttagat
attaagggaagcaaggaagttactgctgcagatataattgaagaagaaggaattgaaatt
ataaataaagatttacatatagcaacacttgaagatgatgggcatttaaatatggagata
actgttaatagaggaagagggtatgtcccccaaaataagaataaaatagatgggaatatt
ggatatataccgattgattctatttatactccagtgaagagggttaattttactgttgag
aatactagagtggggcaagttactgattatgataaattaactatagaagtatggactaat
ggttctataaaagtagatgaggcaataagttattcggctaaaatattaattgaacatttt
aaattatttttaggtttaactaaagaggcaaatgaagttgttgtaatggtacaaaaagaa
gaagataaaaaagagaaagtacttgagatgactattgaagagttagatttttctgttagg
agttataactgtttaaagagggcaggtataaatacagtacaagaacttgcacaaaaatct
ttagaagatatgatgaaagttagaaatttaggcaagaaatctttagaagaagttgaaaag
aaacttaaggatttgggattaagtttaaaacaaagtgatgaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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