KEGG   Alistipes shahii: AL1_16820
Entry
AL1_16820         CDS       T02578                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase/endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
ash  Alistipes shahii
Pathway
ash03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ash00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AL1_16820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ash03400]
    AL1_16820
Enzymes [BR:ash01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     AL1_16820
DNA repair and recombination proteins [BR:ash03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AL1_16820
 Prokaryotic type
     AL1_16820
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S DUF2400 RecR_HhH
Other DBs
NCBI-ProteinID: CBK64071
UniProt: D4IMA9
Position
1932515..1933177
AA seq 220 aa
MTTKQRYDGVIAWFSEHMPVAESELHYSDPYQLLVAVILSAQCTDKRVNMTTPALFEAFP
TPYHMARATAEEIYPYIRSISYPNNKARNLAGMARMLCEEFGGEVPSDLEQMQRLPGVGR
KTANVLGAVLWQKEVMPVDTHVFRVSERIGLTTRSKTPLQTELTLEKNIPGHLLPLAHHW
LILHGRYVCVARAPKCDECGIATWCRKYASDHRQPKTLKI
NT seq 663 nt   +upstreamnt  +downstreamnt
atgacgaccaaacaacgttatgacggcgtaatcgcctggttttcggagcatatgcccgtg
gccgaaagcgaactgcactactcggacccttatcagctgctggtggcggtgatcctctcg
gcgcagtgcaccgacaaacgggtcaacatgaccaccccggcgctgttcgaagcctttccc
acgccgtaccacatggcccgcgccacggccgaggagatttatccctacatccggagcatc
tcctacccgaacaacaaggccagaaacctcgcgggaatggcccggatgctctgcgaggag
ttcggcggcgaagtcccgagcgacctggagcagatgcagcgtctgcccggcgtgggccgc
aagacggccaacgtgctgggggctgtgctgtggcagaaggaggtgatgccggtcgacacg
cacgttttccgcgtctcggagcgcatcgggctgacaacccgttcgaaaaccccgttgcag
acggagctgaccctcgaaaagaacattcccggccatctgctgcctctggcccaccactgg
ctgatcctccacgggcgttacgtctgcgtggcccgtgcccccaaatgcgacgaatgcggc
attgcgacctggtgccgcaaatacgcctccgatcaccgccaacctaaaaccttgaagata
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system