KEGG   Alistipes shahii: AL1_25320
Entry
AL1_25320         CDS       T02578                                 
Name
(GenBank) methionine synthase (B12-dependent)
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
ash  Alistipes shahii
Pathway
ash00270  Cysteine and methionine metabolism
ash00450  Selenocompound metabolism
ash00670  One carbon pool by folate
ash01100  Metabolic pathways
ash01110  Biosynthesis of secondary metabolites
ash01230  Biosynthesis of amino acids
ash04980  Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:ash00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    AL1_25320
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    AL1_25320
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    AL1_25320
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    AL1_25320
Enzymes [BR:ash01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     AL1_25320
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding B12-binding_2
Other DBs
NCBI-ProteinID: CBK64741
UniProt: D4IP79
Position
complement(2884152..2887766)
AA seq 1204 aa
MTTTLYDQLERRILLLDGGFGTMVQGYGLQEEDYRGRRFAGWPVQLKGCNDLLALTRPDV
VREIHEKYLRAGADIIETDSFNANAVSLADYRLEECAYEISKVAAGIARSAADEFTARNP
QKPRFVAGSVGPTNRTASMSADVQNPAAREVTFAQLVEAYTDQVRGLVDGGADILLVETV
FDTLNAKAALWAIDTLCERLGRAIPVMVSGTLADASGRTLSGQTVEAFAVSVSHANLLSV
GLNCAYGAKQLLPYLERLAAVAGTRISAHPNAGLPNVMGGYDETPEMFAGDVGEYMRRGL
VNIVGGCCGTTPAHIFELSKISGDYAPRPVPAPKHITTLSGLEPLRIVPEANFINVGERT
NVAGSARFARLIREANYEEALSVARAQVDAGAQIVDVCMDDGLIDGPAAMRTFLNLMASE
PEIARVPVMIDSSKWEVLQAGLEVTQGKSVVNSISLKEGEAEFLRRAAEIHRFGASAVVM
LFDERGQADTFERKAEVAERAYKLLTDNGFPPEDIIFDPNVLAVATGIAEHDGYAKAFID
ATRWIKEHLPHAKVSGGVSNLSFAFRGNNTVREAMHSAFLYHAIRAGMDMGIVNPQMLKV
YSQIEPELLCRVEDVILCRRADAAERLAEYAHGVQQTAQAQPQAPDAWRAGTLGERIAHA
MLKGVADYVEQDALEGYEALGSPMAVIDTLLMPAMEQVGTLFGEGKMFLPQVVKTARVMK
RAVAALTPYIEQGSAANAHNSGKVLIATVKGDVHDIGKNIVAVVMACNGYEIRDLGVMVE
PERIVEEAVAWGAQCICLSGLITPSLDEMARVCEELERRGLRIPVIIGGATTSDLHTAVK
IAPVYSGVAVHSANASRNSQILAQLLGPDGDLYADKVKVDQQVLREEYARRLRERDLIPI
AEARAARRGAAQHEPVVPLHTGRMVFPDFDVADAEPYIDWSFFFAAWGLKGRYPEILDHP
EKGAEARKVFADAQALLARIRDERLLTLQGVAGIFPARSEGDDILVTDAKGREKRLPMLR
NQTRGEENLSLADFIAPDGDWIGCFALTAGIGLKELAEKFRAGGDDYSAIMAKLLADRLT
EAFAEAVHAFMRREMWGYETGTPPTPEQAVRGQYRGRRMAFGYPASPDHSLKREVFDLLA
VEVTTGMQLTENWMIDPGEALCGLMFSDADYFSVGTIGAEQLLDYARRRGMEAETVKKII
PNNV
NT seq 3615 nt   +upstreamnt  +downstreamnt
atgacgacaacgctatacgaccaactggagcgccgcatcctgctgctcgacggaggcttc
ggcacgatggtgcagggctacggactgcaagaggaggactaccgcggccggcggttcgcc
ggctggccggtgcagctcaagggctgcaacgacctgctcgcgctgacccgcccggacgtg
gtgcgcgagattcacgaaaaatacctgcgggcgggagccgacatcatcgaaaccgactcg
ttcaacgccaacgccgtgtcgctggccgactaccggctcgaagagtgcgcttacgagatt
tcgaaggtcgcagccggaatcgcacgcagcgcggccgacgagttcacggcccgcaacccg
cagaagccgcgtttcgtggcgggatcggtgggtcccacgaaccgcacggcctcgatgtcg
gccgacgtacagaatcccgcggcccgcgaggtgaccttcgcacaactggtcgaagcatat
acggatcaggtgcggggactggtggacggcggggcggacatcctgctggtggagaccgtt
ttcgacacgctcaacgccaaggcggccctctgggccatcgacacgctctgcgagcggctg
ggccgcgcgatccccgtaatggtctccggaacgctcgccgacgccagcggccgcaccctc
tcggggcagaccgtcgaggccttcgccgtctcggtgtcgcatgcgaacctgctgtcggtc
gggctgaattgcgcctacggggccaagcagctgctgccctacctcgaacggctggcggca
gtggccggaacgcgcatctcggcgcacccgaacgcagggcttcccaacgtgatgggcggt
tacgacgagacgcccgaaatgttcgccggggatgtcggcgagtatatgcgtcgcggactg
gtgaacatcgtgggcggctgctgcggcacgacgcccgcccacatattcgaattgtcgaaa
atatccggagactacgccccgcggcccgttcccgcgccgaagcatatcacgaccttgagc
ggtctggagccgctgcgaatcgtccccgaagccaacttcatcaacgtcggcgaacgcacg
aacgtcgccggatcggcccgtttcgcaaggctgatccgcgaagccaactacgaagaggcg
ctctcggtggcccgcgcacaggtcgacgccggggcgcagatcgtcgacgtctgcatggac
gacgggctgatcgacggtccggcggcgatgcgcacgttcctcaacctgatggcctcggag
ccggagatcgcccgcgtgccggtgatgatcgactcgtcgaaatgggaggtacttcaagcg
ggacttgaagtgacgcagggtaagtcggtggtcaactccatctcgctcaaggagggcgaa
gcggaattcctgcgccgggccgcggagatccaccgcttcggcgcttcggccgtagtgatg
ctcttcgacgagcggggccaggccgacaccttcgaacgtaaagcagaggttgcggagaga
gcctacaagctattgacggacaacggatttccacccgaagacatcattttcgaccccaac
gtgctggccgtcgcaacgggcattgcggagcacgacggctacgccaaggcgttcatcgac
gcgacgcgctggatcaaggagcaccttccccatgcgaaggtctcgggcggcgtgtcgaac
ctttcgttcgccttccgcggcaacaacacggtgcgcgaggcgatgcactcggcgttcctc
taccacgccatccgggccggaatggacatggggatcgtcaacccgcagatgctcaaagtg
tacagccagatcgaacccgaactgctctgccgcgtcgaggacgtgatcctctgccgccgg
gccgacgccgcggagcggctcgcggagtatgcccacggggtgcagcagacggcccaggcg
cagccgcaggcccccgacgcatggcgtgcggggacgctcggagagcgtatcgcccatgcg
atgctcaagggcgtggctgactacgtggagcaggatgcgctggagggttacgaggcgctg
ggaagcccgatggccgtgatcgacacgctgctgatgcctgccatggagcaggtcggcacg
ctgttcggcgagggcaagatgttcctgccgcaagtggtgaagaccgcccgcgtgatgaaa
cgcgcggtggcggcgctgacgccctatatcgaacaggggtcggccgcgaatgcgcataat
tcggggaaagtgctgatcgccaccgtgaaaggcgacgtgcacgacatcggcaagaacatc
gtggcggtcgtgatggcctgcaacggttacgaaatccgggacctgggcgtgatggtcgag
ccggaacgcatcgtcgaggaggcggtggcgtggggcgcgcagtgcatctgcctgagcggg
ctgatcaccccgtcgctcgacgaaatggcccgcgtctgcgaggagctggaacggcgaggg
ctgcgcattccggtcatcatcggcggcgcgacgacctcggacctccacacggcggtgaag
atcgccccggtttattcgggcgtggcggtccactccgcgaacgccagccgcaacagccag
atactggcgcagctgctcggccccgacggcgacctttacgccgacaaggtgaaagtcgac
cagcaggtcctgcgcgaggagtacgcccgccggctgcgggagcgcgacctcattccgatc
gccgaagcgcgcgcggcgcggcgcggcgcggcgcagcacgaacccgtcgtgccgctccac
acggggcgcatggtcttccccgacttcgacgtggccgacgccgaaccgtacatcgactgg
agtttcttcttcgcggcgtggggactcaaggggcgttaccccgagattctcgaccatccc
gaaaagggcgccgaggcgcgcaaggtcttcgccgacgcccaggccctgctggcccgcatc
cgcgacgagcggctgctgacgctgcaaggggtagcgggcatcttcccggcacgctccgag
ggcgacgacattctggtgacggacgcgaaagggcgcgaaaaacgcctcccgatgctgcgc
aaccagacgcgcggcgaggagaacctgtcgctggcggacttcatcgcaccggacggcgac
tggatcggctgtttcgccctgacggccggcatcgggctgaaggagctggcggaaaagttc
cgcgccgggggcgacgactattcggccatcatggccaaactgctggccgaccgcctcacg
gaagccttcgccgaggccgtgcacgccttcatgcggcgcgagatgtggggctacgaaacg
ggcacgccgcccacccccgagcaggcagtccgcggccagtaccgcggccgccgcatggcc
ttcggctacccggcctcgcccgaccattcgctcaaacgcgaggtcttcgacctgctcgcg
gtcgaggtgacgaccggaatgcagctgaccgaaaactggatgatcgaccccggggaggcg
ctgtgcggactgatgttctccgacgccgactacttttcggtcgggaccatcggcgccgaa
cagctgctcgactacgcacgccgccgcggaatggaggccgaaaccgtaaaaaagattata
ccgaacaacgtatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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