KEGG   Actinobacillus suis H91-0380: ASU2_10770
Entry
ASU2_10770        CDS       T02262                                 
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
asi  Actinobacillus suis H91-0380
Pathway
asi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:asi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ASU2_10770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:asi03019]
    ASU2_10770
   03016 Transfer RNA biogenesis [BR:asi03016]
    ASU2_10770
Enzymes [BR:asi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     ASU2_10770
Messenger RNA biogenesis [BR:asi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ASU2_10770
Transfer RNA biogenesis [BR:asi03016]
 Prokaryotic type
  tRNA degradation factors
   ASU2_10770
SSDB
Motif
Pfam: RNB CSD2 OB_RNB S1 HTH_12 Tricorn_C1
Other DBs
NCBI-ProteinID: AFU20282
UniProt: K0G053
Position
complement(2356854..2359217)
AA seq 787 aa
MIVDPNYQQELEKYENPVPSREFILNTIREFDAPMSREELLEAFHIYDEERIEGVRRRLR
AMENDGQLIFTKRKRYALPEKMDLIKGTVVGHRDGYGFLQVEGGEKSDDWFIPNNQMTRV
MHGDFVLAQPNGTDRRGRREVRIVRVLEARKKQIVGRLFLESGIGFVVPDDSRLTQDILI
PDDQRMGARMGQVVVVELQERKASFNRPVGFITEILGDNLAPGMEIEIALRNHDIPHVWP
EGVEKQIRQFNEEVPEEAKLGRVDLRDLPLVTIDGESARDFDDAVFAKKEGDGWRLWVAI
ADVSYYVRPKTALDLEAANRGNSVYFPNRVIPMLPEILSNGLCSLNPQVDRLCLVAEMTV
SKKGELTGYKFYEAVMNSHARLTYTKVWKMLEGDEALRERYAPLVPHLETLNEMFQVLVK
ARQARGAIEFETVENQFIFNPQGRIERIEPLIRNDAHKIIEECMILANIASARFVEKANE
PALFRIHDKPSEEKLTSFKSFIKECGLTWNVGLDPEPKDYAELIEQLADRPDRELIQTML
LRSLKQAVYAADNVGHFGLALTEYAHFTSPIRRYPDLLLHRAIKYLIEKEKGNTRNYTDG
GGYHYKLDDIDQFGDKCSATERRADEATREVADWLKCEFMQDHLGETFEGVISSVTGFGL
FVKINELLIDGLVHISTLDNDYYHYDADRQRLVGGSGIIYRLGDPVKVKVINVSLDDKKI
DFALIGNLRKGIAVGKTAKQKAKKVGDKPIFKEPKTIKATKSKPKKEKAARKTAKKAKKP
AATKRKK
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgatagtagatcctaattaccaacaagaactcgaaaaatacgagaatcccgtgccgagt
cgggaatttattttaaataccattcgagaatttgatgcaccgatgagccgtgaagaactg
ctcgaagcgtttcatatttatgatgaagagcgtatcgaaggtgttcgtcgccgcttacgt
gcgatggaaaatgacggacaattaatttttaccaaacgtaaacgttatgccctgccggaa
aaaatggacttgataaaaggtacggttgtcggtcaccgtgacggctacggctttctgcaa
gtagaaggtggtgaaaaaagcgatgactggtttattccgaataaccaaatgacacgagtg
atgcacggtgattttgtgcttgctcagccaaacggaaccgatcgccgaggtcgccgtgag
gtacgcattgttcgtgttttagaagcacgtaaaaaacaaattgtcggccgtttattcctt
gaaagcggcattggttttgttgtgccggacgacagccgtctcactcaagatattttaatt
cctgacgatcaacgtatgggcgcaagaatggggcaagtggttgtagtggaactgcaagaa
cgcaaagccagtttcaaccgcccagtcggttttattaccgaaatcttaggcgataacctc
gcaccaggcatggaaatcgaaatcgcattgcgtaaccacgatattccgcacgtttggccg
gaaggtgtagaaaaacaaattcgccaatttaatgaagaagtaccggaagaagctaagctt
ggtcgagtagatttacgtgatttacctttggtcacgattgacggtgaaagtgcgcgagat
tttgacgatgccgtttttgctaagaaagaaggtgacggttggcgtttatgggtagcgatt
gccgatgtaagctattacgttcgcccgaaaaccgcacttgatttagaagcggcaaatcgt
ggtaactcggtttacttcccaaatcgagtcattccgatgttaccggagattttatcaaac
ggtttgtgttcactgaatccacaagttgaccgcttatgtctggtggcggaaatgactgta
tccaaaaaaggcgaactgaccggctataaattttatgaagcggtaatgaactcacacgcc
cgtttaacctataccaaagtttggaaaatgttagaaggcgatgaagcattacgtgagcgt
tacgcaccgctcgtaccacatttggaaaccttgaacgaaatgttccaagtgttagtcaaa
gctcgtcaagctcgtggtgcaattgaatttgaaacggtggaaaaccaatttattttcaat
ccgcaaggcagaatcgaacggattgaaccgctgattcgtaacgatgcacataaaattatc
gaagagtgtatgattttagcaaatatcgcttcagcccgttttgtcgaaaaagcgaatgaa
ccggcactattccgtattcacgataaaccaagcgaagaaaaactgaccagttttaaatcc
tttatcaaagaatgtggattgacttggaatgtagggcttgatccggaaccaaaagactat
gccgagctgattgaacagcttgccgatcgtccggatcgtgagttaattcaaaccatgttg
cttcgctcacttaaacaggctgtatatgcggcagataatgtagggcatttcggtttagcg
ttaaccgagtatgctcactttacttcgccgattcgtcgttatccggatttactgttacac
cgtgcaattaagtatttgattgaaaaagaaaaaggtaacactcgcaattatacggacggt
ggtggctaccactataaattggacgacatcgatcaatttggtgataaatgttctgcaacc
gagcgccgtgcggacgaagcaacccgtgaagtagcagattggctgaaatgtgaatttatg
caagatcatctcggtgaaacgttcgaaggggtgatttcaagcgtcaccggtttcggttta
ttcgttaaaatcaatgagctactaattgacggtttagtacatatttcaacattagataac
gattactatcattatgatgcagacagacaacgtttggtcggcggtagtggcattatttat
cgcttaggtgatccggtaaaagtgaaagtaattaatgtgagcttagatgataagaaaatc
gattttgcgctaatcggtaatttgcgtaaagggattgcagtgggcaaaacggcgaagcag
aaagcgaaaaaagttggcgataaaccaatctttaaagagccgaaaaccatcaaagcaacg
aagtcgaagccgaaaaaagaaaaagctgctcgtaaaaccgccaaaaaagctaagaaacca
gcagcaactaaacgtaagaaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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