KEGG   Aquicella siphonis: AQUSIP_10790
Entry
AQUSIP_10790      CDS       T06267                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
asip  Aquicella siphonis
Pathway
asip03030  DNA replication
asip03430  Mismatch repair
asip03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:asip00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AQUSIP_10790 (dnaE)
   03430 Mismatch repair
    AQUSIP_10790 (dnaE)
   03440 Homologous recombination
    AQUSIP_10790 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:asip03032]
    AQUSIP_10790 (dnaE)
   03400 DNA repair and recombination proteins [BR:asip03400]
    AQUSIP_10790 (dnaE)
Enzymes [BR:asip01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AQUSIP_10790 (dnaE)
DNA replication proteins [BR:asip03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AQUSIP_10790 (dnaE)
DNA repair and recombination proteins [BR:asip03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AQUSIP_10790 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C SPO11_like
Other DBs
NCBI-ProteinID: VVC75782
UniProt: A0A5E4PH50
Position
1:complement(1137634..1141083)
AA seq 1149 aa
MEPNFIHLRIHTEYSLSDGLLTIPALMEKVAAYAMPAIAITDLSNLYGMVKFYQTAIKSG
IKPLIGVDLWIESAHPSGASRLTLLCQNQEGYKNLLKLVSKSYLHGQTDAGKPVVRKAWL
TSLSNGLIALSGGMEGDAGMAMLSQDRESAKACLSSWSSLFPERFYIEISRIGKPQENEY
IQEAVSLAEALSIPIVATNDVRFLEKEDYEAHEARVCIQEGMTLNDPQRPHCYTDQQYLR
SQQEMLDLFADLPESLINSVEIAKRCNVTFSLGKSKLPHFPVPEGYNAETFLDVSARKGL
DERLKTLGGNRSKDLPLNREAYDRRLERELKVINEMGFAGYFLIVADFTKWSKENGIPVG
PGRGSGPGSLVAYALKITDLDPLALELLFERFLNPERVSMPDFDIDFCMEGRDRVIEYVM
NKHGHDSVSQIITYGTMAAKAVVRDVGRVLALGYGYVDKIAKLIPFEIGMTLEKALEQEP
LLRERYEQEEEVRTLIDLARKLEGITRNVGKHAGGIVIAPGKLTDFVPLYCEANDAAHPV
TQFDKDDVESIGLVKFDFLGLKTLTIIDRALRVINQSRSSQKQPPIDISLIPLDDTQTFK
LLKACKSTAVFQLESHGMRDLIKRLQPDCFEDLIALVALFRPGPLQSGMVDDFINRKHGR
AKVTYPHPRLEPVLRPTYGVILYQEQVMQIAQVLANYTLGAADILRRAMGKKKPEEMAKQ
REIFCAGAQANGISAELANQIFDLMEKFAGYGFNKSHSASYALIAYQTAWLKAHHPAAFM
AAVLSSDMDRTEKVIILLDECQDMKLHVSPPDINSSDYFFNVIDDHHLMYGLGAIKGVGA
AAIENLIAARREAGPFRDLFDFCQRVDLRKINRRVLEALIKSGCFDALGTHRASLLASLN
QALQHAEQALHNQTYGQHDLLGSLSSANSPQYVDTPPWPDEVQLQGEKETLGFYLTGHPL
RRYLNELSHFTTCRISELHPGEHKTARIAGIVANIRTRQTKRGDRIGIFALDDGATQIEV
ICFSEAYQKYRPLLTEDQILIVEGEVSMDDFSNSPRVVARDLFTLDQARERFAKQLRIHL
PPARQLDVQHLKQLLCKYTGGGCSVIIRCLRGNIQADVRLGSAWLVKPNEALLAAIRDNL
TVEDIEFIY
NT seq 3450 nt   +upstreamnt  +downstreamnt
atggaacccaatttcattcatttacgcatacatacggaatattctttaagtgatggttta
ttgaccattcctgcccttatggaaaaagttgcggcttatgccatgccagccatcgctatt
acggatctctctaatctttacggcatggtaaaattttatcagacagcgatcaaatccggg
atcaagccattgattggcgttgatttgtggattgaatccgcccatccttcaggcgcctcc
cgccttaccctattgtgtcaaaaccaggagggttataaaaatctcttgaagctggtttcc
aaaagttatcttcacgggcaaaccgatgccggcaaaccggtagttcggaaagcctggcta
acatcgctgtcaaatggcttgatcgctctatccggcggcatggaaggggatgcggggatg
gccatgctgtcgcaagaccgggaatcggccaaagcttgtctttccagctggagcagcctt
tttcctgaacggttttacattgaaatcagccgcatcggaaaaccacaggaaaatgaatac
atccaggaagcggtcagtctcgcggaagccctgtccatcccgattgtcgccaccaatgat
gtgcgctttctggaaaaagaagattacgaggctcacgaagcgcgagtatgcatacaggaa
gggatgacactcaacgatccgcagcggcctcactgttacactgaccagcaatatctgcgc
agccagcaggaaatgctggatttatttgctgacttaccggagtccctgatcaattcggtt
gaaattgccaaacgctgcaatgtgacattttccctgggaaagagcaaacttccgcacttt
ccggttcctgaaggctataatgccgagacatttctagatgtaagcgcaagaaaaggtctg
gatgaacgcctgaaaaccctgggcggcaaccgttccaaagacctgcccctgaaccgtgaa
gcgtacgaccgccgactggaaagagaattgaaagtcatcaatgaaatgggattcgcggga
tattttctcattgtcgctgattttaccaagtggtctaaagaaaatggcatacctgttggc
cctggccgcggttcaggcccaggatcgctggtggcgtatgcgcttaaaattacagatctg
gatccgctggctctggagctgctttttgaacgttttcttaatcctgaacgcgtctccatg
ccggactttgatattgatttttgcatggaaggccgtgaccgtgtcattgaatacgtcatg
aacaaacacggccatgacagcgtatcgcaaatcatcacctacggcaccatggcggcaaaa
gccgtcgtacgcgacgtcgggcgtgtactcgcgctcggttacggttatgtggataaaatc
gccaagctgattccgtttgaaatcggcatgacactcgagaaagcgctggaacaggagcct
ttgctgcgcgaacggtatgaacaggaagaagaggtgcgcacactgattgatctcgcacgc
aaactggagggtattacgcgtaatgttggaaaacacgcgggcggtatcgtcattgctcca
ggcaagctgactgattttgtaccgctatactgcgaagccaatgatgccgctcatcccgtg
acgcagtttgacaaggatgatgttgaatccataggactagtcaaattcgattttttaggt
ttaaaaacactcaccattattgaccgggccttgcgcgtcatcaatcagtcccgaagcagc
cagaaacagcctcccatcgatatcagcctgattccgctggacgatacccagacattcaaa
ttattgaaagcctgtaaatcaaccgccgtgtttcaacttgaatcgcatggcatgcgtgat
ttgatcaaacgcctgcagccagattgttttgaggatttgatcgcgcttgttgcacttttt
cgacccggccctctgcaatcaggcatggtggatgatttcatcaaccgtaaacatggccgc
gcgaaagtcacgtatccgcatcccaggctggaaccggttctgcgtcctacgtatggcgtc
atcctgtatcaagagcaagtcatgcaaatcgcccaggtcctcgccaattataccctgggt
gccgcggatattttgcgccgcgccatggggaagaaaaagccagaagaaatggcaaaacag
cgcgaaattttctgcgccggcgctcaagctaacggaataagcgcggaattggccaaccag
atttttgatttgatggaaaaattcgccggttatggattcaataaatctcactccgcctcc
tacgctttgatcgcctatcagacagcatggctgaaagcccaccaccctgccgcattcatg
gccgcggtcttgtcttcggatatggacagaactgaaaaagtcattattctgctggatgaa
tgccaagacatgaagctgcatgtctcgccgcccgatatcaatagcagtgattatttcttt
aatgtcattgatgatcaccacttgatgtatggcctgggcgcaatcaagggagtaggcgcg
gcggccatcgaaaacctgattgccgcaaggcgggaagccggtccgttcagggatttattt
gatttttgccagcgtgttgacttgcgaaaaatcaatcggcgggtgctggaggctcttatc
aagtctggctgctttgatgcgttgggcacgcatcgcgcttccttgctcgcctcactgaac
caggcattgcagcatgccgaacaggcattacataatcaaacctatggacaacacgatctg
cttggaagcttatccagcgccaactcgccccagtatgttgacacgccgccctggccggat
gaagtccagctacagggcgaaaaggaaaccctgggattctacctcacgggacatcccctg
cggcgctatctgaatgaactttctcattttacgacttgccgtatttcagaactgcacccc
ggcgagcataagactgccaggatcgcgggcatagtagcgaacattcggacccgccagacc
aagcgcggtgaccgcatcggcattttcgcgctggacgatggcgcgacgcaaattgaagta
atctgttttagcgaagcttatcagaaataccggccgctgctgacagaagaccagatactg
attgttgaaggcgaagtcagcatggacgattttagcaatagtccccgcgttgtcgctcgt
gaccttttcacgctagaccaggcacgagagcgctttgccaaacagttacgtatccatctg
ccgccagcaagacaattggatgttcaacacctgaagcaactcttgtgcaagtatactggc
ggaggatgttctgtcattattcgctgtctgcgcggtaatattcaggctgatgtacgtttg
ggcagcgcctggctggtcaaacccaatgaagcactgctcgcggccattcgggataatcta
accgtggaagatattgagtttatctattag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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