KEGG   Alligator sinensis (Chinese alligator): 102374234
Entry
102374234         CDS       T02922                                 
Symbol
TNPO1
Name
(RefSeq) transportin-1
  KO
K18752  transportin-1
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:asn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102374234 (TNPO1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:asn03019]
    102374234 (TNPO1)
   03009 Ribosome biogenesis [BR:asn03009]
    102374234 (TNPO1)
Messenger RNA biogenesis [BR:asn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102374234 (TNPO1)
Ribosome biogenesis [BR:asn03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    102374234 (TNPO1)
  Pre-60S particles
    102374234 (TNPO1)
SSDB
Motif
Pfam: HEAT_EZ HEAT HEAT_2 Arm Vac14_Fab1_bd Cnd1 IBN_N Adaptin_N PDS5 CEP104-like_TOG MMS19_C Dopey_N UNC45-central RTP1_C1 DUF3689
Other DBs
NCBI-GeneID: 102374234
NCBI-ProteinID: XP_014376003
UniProt: A0A1U8D3W1
Position
Unknown
AA seq 862 aa
MKSNGIFKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFHNFPNGVT
DFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPELLPKLCSLLDSEDYNTCEGA
FGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQA
LMLHIDSFIENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMISIVEYMLQRTQDQ
DENVALEACEFWLTLAEQPICKDVLCRHLTKLIPVLVNGMKYSEIDIILLKGDVEEDEAI
PDSEQDIRPRFHRSRTVAQQHEEDGIEEDDDDDDELDDDDTISDWNLRKCSAAALDVLAN
VFRDELLPHILPLLKELLFHPEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLS
DKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLE
EEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPP
LIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLHNA
QPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSF
ALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIP
MVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNE
EKDSAFRGICTMITVNPSGVVQDFIFFCDAVASWISPKDDLRDMFCKILHGFKNQVGDEN
WRRFSDQFPLPLKERLAAYYGV
NT seq 2589 nt   +upstreamnt  +downstreamnt
atgaagtctaatggcatttttaaactggaacaactcaatcagtatccagattttaacaac
tatctgatatttgttcttacaaaattaaaatctgaagatgaacctacacggtccctgagt
ggtctcatcttgaagaataatgtgaaagctcattttcacaactttcccaatggggtaact
gattttattaaaagtgaatgtctaaacaacattggtgattcttccccactaattagagcc
actgtaggtattttgattacaaccattgcctcaaagggggaattgcaaaactggcctgaa
ctcttaccaaagctttgcagcctgttggattctgaagactacaatacgtgtgagggtgct
tttggtgctcttcagaagatatgtgaagattctgctgaaatcttagatagtgatgtttta
gacagacccctcaatatcatgatccctaaatttttacaatttttcaagcacagcagccca
aaaataaggtcccatgctgttgcctgtgtcaatcagtttattatcagtaggactcaagct
cttatgttacacattgattcttttattgagaatctctttgcgttggctggcgacgaggag
cctgaagtacggaaaaatgtctgtcgggctcttgtgatgttgctggaagttcgaatggat
cgtcttcttcctcatatgattagtatagttgagtatatgcttcagaggacccaggaccaa
gatgaaaatgtggctttggaggcttgtgagttttggctgaccttggctgagcaaccaatt
tgtaaagatgtactgtgtcgccatcttactaagttaatacctgtgttagtaaatggtatg
aagtactcagaaatagatattattctgctgaagggggatgttgaagaagatgaagctatt
ccagatagtgaacaggacataagaccacgttttcatcgttcacgaacagtggcccagcag
catgaagaagatggtattgaggaagacgacgatgatgatgatgagcttgatgatgatgat
actatttctgactggaatttaaggaagtgttctgctgctgcacttgatgtccttgccaat
gtattccgtgatgaacttctgccacatattttgccccttctgaaagaattgctcttccat
ccagaatgggtggtcaaagaatctggtatcctggttctaggagcaattgctgaaggctgc
atgcagggtatgattccatatcttcctgaactaatccctcaccttattcagtgcctctct
gataaaaaggctcttgtgcgctccattacatgctggactcttagccgctatgcacactgg
gtagttagtcaacccccagacacatacttgaagccattaatgactgagttgctaaagcgt
atcctggatagcaacaagagagtacaagaagctgcctgcagtgcctttgctactctagaa
gaggaggcttgtacagaacttgttccttaccttgcttacatacttgacactctggtcttc
gcgtttagtaaataccagcataagaatcttcttattctttacgatgccattggaacttta
gcagattctgtaggacatcatctaaacaaaccagaatacatacagatgttgatgcctcca
ctaatccagaaatggaatatgttgaaggatgaggataaagatctcttccctttactagag
tgcctgtcttcggttgccactgccttgcaatctggcttccttccatactgtgaacctgtg
taccagcgttgtgtaaacttggtacagaagactcttgcacaagccatgttgcacaatgct
cagccagatcaatatgaggctcccgataaagacttcatgatagtggctcttgatttactc
agtggcttggctgaaggacttggaggcaacattgaacagctagtggctcgcagcaatatc
ctgacattaatgtaccagtgcatgcaggataaaatgcctgaggtacgacagagttcattt
gccttgttaggtgacctgactaaagcgtgttttcagcatgttaagccttgcatagctgat
ttcatgccgattttgggaaccaacctaaatcctgagttcatttctgtgtgcaacaatgcc
acgtgggcaattggagaaatctccattcaaatgggtatagaaatgcagccttatattcca
atggtgttgcaccagcttgtagaaataattaacagacccaacacaccaaagacgttgtta
gagaatacagcaataacaattggtcgtcttggttacgtttgtcctcaagaggtggccccc
atgctacagcagtttataagaccctggtgcacctctctgcggaacataagggacaatgag
gaaaaagattcagcatttcgtgggatttgtaccatgatcactgtcaaccccagcggagta
gtccaagactttatatttttttgtgatgctgttgcatcgtggattagtccaaaagatgat
ctgagagacatgttctgtaagatccttcatggatttaaaaatcaagtcggggatgaaaat
tggaggcgtttctctgaccagtttcctcttcccttaaaagagcgccttgcagcttactat
ggagtttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (33)   

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