KEGG   Alligator sinensis (Chinese alligator): 102374912
Entry
102374912         CDS       T02922                                 
Symbol
NUP88
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup88
  KO
K14318  nuclear pore complex protein Nup88
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:asn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102374912 (NUP88)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:asn03019]
    102374912 (NUP88)
Messenger RNA biogenesis [BR:asn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102374912 (NUP88)
SSDB
Motif
Pfam: Nup88 Flagellin_N Syntaxin-6_N
Other DBs
NCBI-GeneID: 102374912
NCBI-ProteinID: XP_006029226
UniProt: A0A1U7S4S5
Position
Unknown
AA seq 691 aa
MALSSLNKNKDERDQDQDGHAAAETPAPAPAPPGCEPAALGRSQTLVCINPPLFDVFQTL
LSPTQHHVALVGPRGMMAVELPKRWGKNSEFEGGKATVSCSTIPIAERFFTSSASLTLKY
AAWYPSESLEPHVVLLTSDNTIRIYSLKVPQTPVKVIALSESEEETSVVNKGRAYRASLG
ETAVAFDFGPITSVPKNVVGPRGNEEGKEEVLAYPLYILYENGETFLTYVNLLQSSGNLG
KLLGPLPMHPAAEDNYGYDACAVLCLPCVPNILVIATESGMLYHCVVLEGEEDDEQTSEK
SWDPRSDLIPSLYVFECVELELALKLASGEEEEPVESDFSCPIKLHRDPKCPSRYHCTHE
AGVHSVGLTWINKLHKFLGSDEEDKDSLLELGAEQKCFVEHILCTKPLPCRQPAPIRGFW
IVSDILGPTMICITSTYECITRPLLSTVHPASPPLLCTREDNEPTVSPLRILAESQHSFE
EHIQSILQRSTANPLLLKSADKDAAPPPEECLQLLSRAIQVFREEYILKQDLAKEEIQQR
VKLLWAQKKKQLEDLNYCREERKSLREMAERLADKYEEAKEKQEDIMSRMKKVLRSFHTQ
LPVLSDSEKEMKKELQAIHDQLQQLGSAIKQVKMKKDYQQRKMEKGTSPRQPSITLSAYQ
SKCIQSILKEEGEHIREMVKQINDIRSHVNF
NT seq 2076 nt   +upstreamnt  +downstreamnt
atggcactgtcgtctttaaataaaaacaaggatgagagagaccaggatcaagatggacat
gcagctgctgaaaccccggccccggccccggccccgccggggtgcgagcccgccgcgctc
ggccgctcccagacgctggtctgcatcaacccgcccctcttcgatgtctttcaaacgctg
ctcagccccacacagcaccacgtggctctcgtgggccccaggggaatgatggccgtggag
ctgcccaagcgctgggggaagaactccgaattcgaaggggggaaagccacggtcagctgc
agcaccattcctattgctgaaaggttcttcactagctcagcatccctcactttaaaatat
gctgcctggtatcccagcgagtcattggagcctcatgttgtgctgttgacttcagataac
actataaggatttatagtctgaaagtgcctcagacacctgtgaaggtgattgctctctca
gagtctgaggaggagacctcggtagtcaataaagggagagcctacagagcatcactggga
gagactgcagtggcgttcgactttgggccgattacatctgttccaaagaatgtggttggg
ccacgagggaatgaggaggggaaagaggaagtgttggcatatcccttgtacatattgtat
gaaaatggggagaccttccttacatacgttaacctactgcaaagctctggaaaccttggt
aagctgttgggtccactgcccatgcacccggcagctgaagacaactatggctatgatgca
tgtgctgttctctgcctgccctgtgtgcccaacatcttggtgatcgctactgaatcaggg
atgctctatcactgtgtggtgctggagggagaagaggacgatgagcagacatcggaaaag
tcttgggacccaagatctgacctgatcccttctctgtacgtgtttgaatgcgttgagctg
gaacttgcactgaaactggcgtcgggggaagaggaggagcctgtggaatcagatttctct
tgcccaattaaactacacagagatcccaaatgccccagtaggtaccactgcacacatgaa
gctggggtgcacagcgttgggctaacctggatcaataaacttcacaaattccttggctcc
gatgaagaagataaagacagtttactagaacttggagcagaacagaagtgctttgtagaa
cacattctctgcacaaagccattgccgtgcaggcagcctgctccaattagaggattctgg
atagtctctgacatcttggggcctacaatgatctgcatcaccagcacctatgagtgcatc
acaaggcctcttctaagcacagtccatccagcatcccctccgctgctctgtacccgggag
gacaatgaaccaacagtctcgcctctccgcatcctggcagaatcgcagcattcatttgag
gagcacatccaaagcatcttgcagcggagcactgccaacccattgcttttgaaatctgct
gataaagatgcagctcctcccccagaagaatgcctgcagctcctcagcagagccatccag
gttttcagggaagaatacatactgaagcaggatctggcaaaggaagagatccagcagaga
gtgaagttactgtgggctcagaaaaagaaacaactggaagatcttaattactgtcgagag
gaaaggaaaagtctgcgggaaatggccgaacgcttggctgacaagtatgaagaagccaaa
gaaaaacaagaagatattatgagcaggatgaagaaagtgctacgtagttttcacacacag
cttccagttttgtcagacagcgagaaggagatgaagaaagaattgcaggcaatacatgat
caactgcagcagctgggaagtgctatcaaacaggtgaaaatgaaaaaggattaccagcaa
aggaagatggaaaaggggaccagtccacgacaacctagtatcaccctcagtgcctaccag
agcaaatgcatccagtctattctgaaagaagagggagagcacataagagaaatggtgaaa
cagatcaatgacatcagaagccatgtgaatttctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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