KEGG   Alligator sinensis (Chinese alligator): 102377229
Entry
102377229         CDS       T02922                                 
Symbol
CACNA1S
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S isoform X1
  KO
K04857  voltage-dependent calcium channel L type alpha-1S
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn04010  MAPK signaling pathway
asn04020  Calcium signaling pathway
asn04260  Cardiac muscle contraction
asn04261  Adrenergic signaling in cardiomyocytes
asn04270  Vascular smooth muscle contraction
asn04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:asn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    102377229 (CACNA1S)
   04020 Calcium signaling pathway
    102377229 (CACNA1S)
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    102377229 (CACNA1S)
  09153 Circulatory system
   04260 Cardiac muscle contraction
    102377229 (CACNA1S)
   04261 Adrenergic signaling in cardiomyocytes
    102377229 (CACNA1S)
   04270 Vascular smooth muscle contraction
    102377229 (CACNA1S)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:asn04040]
    102377229 (CACNA1S)
Ion channels [BR:asn04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   102377229 (CACNA1S)
SSDB
Motif
Pfam: Ion_trans GPHH Ca_chan_IQ CAC1F_C PKD_channel DUF2670 Pedibin
Other DBs
NCBI-GeneID: 102377229
NCBI-ProteinID: XP_025049100
UniProt: A0A3Q0FSH7
Position
Unknown
AA seq 1898 aa
MEPASVQEDQKKKQQKEKSKKPVPPAVPRPARALFCLTLQNPLRKACISIVEWKPFEIII
LLTIFANCVALAVYLPMPEDDTNATNSRLEKIEYVFLFIFTIEAMLKIIAYGFLFHADAY
LRNGWNVLDFAIISLGLFTMMLEQISVMQGAPPSGKGGFDVKALRAFRVLRPLRLVSGVP
SLQVVLNSIIKAMVPLLHIALLVLFMIIIYAIVGQELFKGKMHKTCYYTGTDIIATVGSE
KPAPCTSTGHGRHCTLNGTDCRGGWPGPNNGITHFDNFGFAMLTVYQCITMEGWTEVLYW
VNDAIGNEWPWIYFVSLILLGSFFILNLVLGVLSGEFTKEREKAKSRGTFQKLREKQQLE
EDLKGYMDWITHAEVVDSVRTRGEGMLPLDEGGSETESLYEIEGMNKWILFFRHWRRWNR
LFRRKCREVVKSKFFYWLVILLITLNTLSIASEHHMQPDWLTHVQDNANRVLLSLFVAEM
LLKMYALGLRQYFMSLFNRFDCFVVCAGIVETILVEMSIMSPLGISVLRCIRLLRIFKIT
KYWTSLSNLVASLLXXXXXXXXXXXGASVLNSIRSIASLLLLLFLFIVIFSLLGMQLFGG
KYDFEDMQVRRSTFDNFPQALISVFQVLTGEDWNSIMYNGIMAYGGPSFPGMLVCIYFII
LFVCGNYILLNVFLAIAVDNLAEAESLTSAQKAKAEERKWRKMSRGYPGKSEEEKQLLAK
KLEQKAKGEGIPTTAKLKVDEFESNVNEIKDPYPSADFPGDDEEDEPEIPLSPRPRPLAE
LQLKEKAVPMPEASAFFIFSPTNKIRILCHRIVNATWFTNFILLFILLSSISLAAEDPIR
AESFRNQILGYFDIGFTSVFTVEIVLKMTAYGAFLHKGSFCRNSFNILDLLVVAVSLISM
GIQSSTISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVIVTTLLQFMFA
CIGVQLFKGKFISCTDPSKITEKECRGSFITYVDGDPTQIQLEQREWQQNDFHFDNVLSA
MMSLFTVSTFEGWPQLLYMAIDTHTEDMGPIYNYRVEMAIFFIIYIILIAFFMMNIFVGF
VIVTFQEQGESEYKNCELDKNQRQCVQYALKARPLRRYIPKNPYQYQIWYVVTSSYFEYL
MFFLILLNTICLGMQHYNQSDEMNHASDILNVTFTILFTVEMFVKLMAFKAKGYFGDPWN
VFDFLIVIGSIIDVILSEIDTVLASSGGLYCLSGGCNSIDSEDNSRVSITFFRLFRVLRL
VKLLSRGEGVRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQMFGKVAMVDGTQINRN
NNFQTFPQAVLLLFRCATGEAWQEILLAASYGKLCDPESDYAPGEEYTCGTGFAYFYFIS
FYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVV
TLLRRIQPPLGFGKFCPHRVACKRLVCMNMPLNSDGTVTFNATLFALVRTALKIKTEGNF
EQANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQEHFRKFMKHQEEY
YGYRPKKNPIEIQAGLRTIEEEAAPEIHRAISGDLTAEEELERAMVEAAMEEGIYRRQGG
LFGQVDNFIEHHSPLQPHVASQRPLQFTEQGSEDIDSPVFLDDFAPERNTNASNANNNNA
ASRISLWPAGTWGADEGRKKRFHLQGRVEYEDELQGKKMSCQTRQLSALAPKCTSHQEKL
QQELSRKRAASVGVCPVSGLHIVPPQMPRAEASTHEQGVEEGEVWQMDGDSDLTREEDPA
ASAPATTLLIQEALISGGLSTLAHDPSFVTVTRNEMAAACQMEMAEVEMAAAEVLKGRKS
LEGEKTTSPRQPVSPTSLHNSHGCSVVCSQEAISATHL
NT seq 5697 nt   +upstreamnt  +downstreamnt
atggagcctgcttctgtccaggaggatcagaagaaaaagcaacagaaggaaaaatcaaag
aaacctgtgccgcctgcagtcccacggccagccagggctctgttctgcttaacccttcaa
aacccacttcgaaaggcatgcatcagtattgtggaatggaaaccctttgaaatcattatc
ctgctgaccatctttgccaactgtgtggcgctggcagtctacttgcccatgcctgaggat
gataccaacgctacaaactcccgcctggagaagatagaatatgtcttcctgttcatcttt
accattgaagccatgcttaagatcattgcttatgggtttttgttccacgcggatgcctac
ctccggaatggctggaacgtgctggactttgccatcatctccttggggctctttaccatg
atgctggagcagatcagcgtgatgcagggcgcacctccgagtgggaagggcggctttgac
gtcaaggccctgagagccttccgggtgctcagacctctgcgcctggtgtcaggagtgcca
agcctgcaggtggtcctgaactccatcatcaaggccatggtgcccctgttgcacatcgca
ctgctcgttctcttcatgatcatcatatatgccattgttgggcaggagctgttcaagggc
aagatgcataagacctgctactacactgggactgatatcattgccacagtggggtcggag
aagccagccccatgtaccagtactgggcatgggcgtcattgcaccctcaatggcacggat
tgcagaggtggatggccagggcccaacaatggcatcacccacttcgataactttggattc
gccatgctgacagtgtaccagtgcatcaccatggagggatggactgaagtcctctactgg
gtgaacgacgccattggaaacgaatggccctggatctattttgtcagcctcatcctgctg
ggctccttcttcattctcaacctagtgctgggtgttctcagtggcgagtttaccaaggag
cgagaaaaggcgaaatcacggggcacgttccagaagctgcgggagaagcagcagctggag
gaggatctgaagggctacatggactggatcacgcatgctgaagtcgtggacagtgttcgg
accagaggagaaggaatgctgccattagatgaaggcggctcagagacagagagcctgtat
gaaattgagggcatgaacaagtggattctcttctttcggcactggaggcggtggaaccgc
ctgttccgcaggaagtgccgtgaagtggtgaagtccaagttcttctattggttggtgatc
ctcctcatcaccctcaacaccctgtcaatagcctctgagcaccacatgcagccagactgg
ctgacccacgtgcaagataatgccaaccgggtgttgctgtcactatttgtggctgagatg
ctgctgaagatgtacgcgctgggcctgcgccaatacttcatgtccctcttcaaccgcttt
gactgcttcgtggtgtgtgctggcatcgtggaaactatcctggtggagatgagcatcatg
tcacctctgggcatctctgtcttgcggtgcatccgcctgctgaggatcttcaagataacc
aagtactggacttctctgagcaacctggtggcatccctgctgnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnggggggcgtccgtgctgaactcaatccgctccattgcttccctcctc
ctcctcctcttcctcttcattgtcatcttctccctcctggggatgcagctctttggaggg
aagtatgactttgaggacatgcaggttcgacgcagcactttcgacaacttcccccaggcc
ctcatcagtgtcttccaggtcctgacaggagaagactggaattccatcatgtacaatggg
atcatggcctatggagggccctccttccctggcatgctggtctgcatttacttcatcatc
ctctttgtctgtgggaactatatcctgctcaatgtcttcctggcgattgcggtggacaat
ctggctgaggctgagagcctgacctctgcccagaaggccaaggcggaggagaggaagtgg
aggaaaatgtccagaggttacccagggaaatctgaggaggagaagcaactactggccaag
aagctggagcagaaagccaaaggggaaggaatccctaccacagccaagctaaaagtagat
gagtttgagtcaaacgtcaatgagatcaaagacccttacccctctgctgacttcccaggc
gacgatgaggaagatgaacctgaaatccccctgagccctcggccacgccccctggcagag
ctgcagctcaaggagaaagctgtgcccatgcctgaagccagtgccttctttatcttcagc
cccaccaacaagatccgaattctgtgccacaggattgtcaacgccacctggttcaccaac
ttcatcctcctcttcattctgctcagcagcatctcactggcggccgaggatcccattcgg
gctgagtccttccgaaaccagattcttggatattttgacattggattcacctctgtgttt
actgttgaaatagttttgaagatgaccgcatatggagcattcctccacaagggatccttc
tgccggaactccttcaacatcctggatctgctggtggtggccgtctccctcatctccatg
gggattcagtccagcaccatttctgtggtgaaaattttgagggtactgagagtcctgcgg
ccactgcgagccattaacagagcaaaggggctgaagcatgtggtccagtgcgtgttcgtg
gccatcaaaaccattggcaacattgtgatagttaccaccttgctgcagttcatgtttgcc
tgcattggggtgcagctcttcaaggggaagtttatcagctgtacagacccgtcgaagata
actgagaaagaatgcagagggtctttcatcacgtatgtggacggcgaccccacgcagatt
cagctggagcagcgtgagtggcagcagaatgacttccactttgacaatgtcctctcggcc
atgatgtccctcttcacagtctcgaccttcgagggctggccacagctgctgtacatggcc
atcgacactcacactgaggacatgggccccatctataactaccgggtggagatggccatc
ttcttcatcatctacatcatccttattgccttcttcatgatgaacatctttgtgggcttt
gtcattgtcaccttccaggagcagggtgagagcgagtacaagaactgcgagctggacaag
aaccagcgccagtgtgtgcagtatgcgctgaaagcccgaccactgagacgctacatcccc
aagaacccctatcaataccagatctggtacgtggtgacctcctcctacttcgagtacctc
atgttctttctgatcctactgaataccatctgcctgggcatgcagcattacaaccagtct
gatgagatgaaccatgcctcagacatcctgaacgtgaccttcaccatcctcttcactgtg
gagatgttcgtcaagctcatggcctttaaagccaagggctattttggcgacccttggaac
gtctttgatttcctcatcgttattggcagcatcattgatgtcatcctgagtgagatagac
actgttcttgcttccagtggcggactgtactgcctaagcggaggctgtaatagcattgac
tctgaggacaactcccgtgtttccatcaccttcttccggcttttccgagtgttgaggttg
gtgaagctgctgagccgaggggaaggagtcaggacccttctctggacctttatcaagtcc
ttccaggccctgccctatgtggcgttgctgatcgtgatgctgtttttcatctacgctgtg
attgggatgcagatgtttgggaaagttgccatggtggatgggacccaaatcaaccggaac
aacaacttccagaccttcccccaagccgtgttgctgctcttcaggtgtgcaacaggagag
gcctggcaggagatcctgctggccgccagctacgggaagctgtgtgacccagagtccgac
tacgccccaggagaagagtacacttgtggcaccggctttgcctacttctatttcatcagc
ttctacatgctgtgtgccttcctgattatcaacctctttgtcgctgtcatcatggacaac
tttgactacctcacgcgtgactggtccatcttgggtccacatcacctggacgaattcaaa
agaatctgggctgaatatgacccagaagccaaggggagaatcaagcacctggatgtggtg
accctgctgaggcgcatccagccacctcttggctttgggaagttctgcccacaccgtgtg
gcttgcaagcgcctggtgtgcatgaacatgcctctgaacagcgatggcaccgttaccttc
aatgccaccctctttgccctggtgaggacggccctcaagatcaagacagaaggtaacttt
gagcaggccaacgaggagctgagagccattatcaagaagatctggaagcgaactagtatg
aagctcctggaccaggtcattccacctattggagatgatgaggtgacagtaggcaagttt
tatgcaactttcctcatccaggagcacttcaggaagttcatgaagcaccaggaggagtat
tatggatacaggcccaaaaagaaccccattgaaatccaggctggcctgaggaccattgaa
gaagaagctgcccctgagatccaccgagcaatctctggagatctgactgctgaggaggag
ctggagagagctatggtggaggcagcgatggaggaagggatatacagaaggcaagggggc
ttgtttggtcaggttgacaacttcattgagcaccatagccccctgcagccccatgtagcc
agccaaagacccctgcagttcactgagcagggcagcgaggacatagactcccctgtcttc
ctcgatgacttcgccccagagaggaataccaatgccagcaatgccaacaacaacaatgca
gcatcacgaataagcctctggcctgctgggacttggggtgcagatgaggggagaaagaag
cgcttccatcttcaggggagggtggagtatgaggatgagctgcaagggaagaagatgtcc
tgccagacacgacagctatctgcattggcgcccaaatgcacctcccaccaggagaagctg
cagcaggagctgagcaggaaacgagcagccagcgtcggggtgtgtccagtgtcagggctg
cacattgttcccccacagatgcccagagcggaggccagcacccatgaacagggagtggag
gaaggggaagtgtggcaaatggatggtgacagtgacctgaccagggaggaagaccctgct
gcctctgcaccagccaccaccttacttatccaggaggctctgatctccggaggcctcagc
actctggcccacgacccatcctttgtgacagtgacgaggaacgagatggctgctgcttgc
cagatggagatggcggaggtggaaatggctgctgctgaggtcctgaagggaaggaaaagc
ctggagggtgagaagactacctctccccgccagcctgtctcacccacatcactacacaac
tctcatgggtgcagcgtggtctgctcccaagaggccatttctgccacccacctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (7)   
   Pfam (7)   
All databases (56)   

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