KEGG   Alligator sinensis (Chinese alligator): 102378753
Entry
102378753         CDS       T02922                                 
Symbol
ITGA1
Name
(RefSeq) integrin alpha-1 isoform X2
  KO
K06480  integrin alpha 1
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn04510  Focal adhesion
asn04512  ECM-receptor interaction
asn04810  Regulation of actin cytoskeleton
asn04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:asn00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102378753 (ITGA1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102378753 (ITGA1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102378753 (ITGA1)
   04810 Regulation of actin cytoskeleton
    102378753 (ITGA1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:asn04147]
    102378753 (ITGA1)
   04515 Cell adhesion molecules [BR:asn04515]
    102378753 (ITGA1)
   04090 CD molecules [BR:asn04090]
    102378753 (ITGA1)
Exosome [BR:asn04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102378753 (ITGA1)
Cell adhesion molecules [BR:asn04515]
 Integrins
  Integrin alpha subunits
   102378753 (ITGA1)
CD molecules [BR:asn04090]
 Proteins
  102378753 (ITGA1)
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_1 Integrin_A_Ig_3 Integrin_A_Ig_2 VWA_2 FG-GAP_3 FG-GAP_2 Integrin_alpha VWA_CoxE DUF974 OAR
Other DBs
NCBI-GeneID: 102378753
NCBI-ProteinID: XP_006017340
UniProt: A0A1U7RG11
Position
Unknown
AA seq 1242 aa
MCRKTATNKQEMPNPAAAAAAEADIKATAAAAPRAALPGPAPGGGSPRRSAAPRAPPAAM
GSRPFRGRNPGVAASCWTLTALIHLSASFNVDVKNAMSFNGPVEDMFGYTVQQYENEEGK
WILIGSPLVGQPKKRTGDVYKCRVGNGNQSPCIKLNLPADTSVPNVMEVKENMTLGTTLV
TNPKGGFLACGPLYAYKCGRLHYTTGICSNVSSTFQVVNAIAPSVQECKTQLDIVIVLDG
SNSIHPWKSVTEFLDSLLKNMDIGPQQTQVGIVQYGQTVVHEFYLNTYSTTEDVQKAAKK
IVQRGGTQTMTALGIDTARNESFTEAHGARRGVQKVMVIVTDGESHDNYRLADVIKDCEN
ENIQRFAIAILGSYKRENLSPEKLLEEIKSIASEPTEKHFFNVSDELALVTIVEALGERI
FALEATTDQQASSFEMEMSQAGFSAHYSQDWIMLGAVGAYDWNGTVVMQKDNTVFMPRNN
TFRDESEKNEPLAAYLGYTVNSATTPEGVLYIAGQPRYNHTGQVIVYKMEGRDVKIIQRL
KGKQIGSYFGSVITTVDINKDSFTDILLVGAPMYMGTEKEEQGKVYVYSLNKTTFEYQMS
LEPIKQTCCSLLKHNSCKTHKNEPCGARFGTAIASVKDLNLDGYNDIVIGSPLEDDHRGA
VYIYHGDGTTLRKEYAQRIASGGDGEKMKFFGQSIHGEMDLNDDGLIDVTIGGLGGAALF
WSRDVAEVNVSMTFTPDKINIQKKNCKMDKKETVCINATICFELRLKSKEHTVYESSIQY
RLTLDSQRQISRSLFMGSKERKIQKNITVKGSECSKHNFYMLDKPDFLHSVKVLLEFNFS
DPESGPVLDSNLPNSVYEYIPFTKDCGLKNICTTDLVLKANASIAGNSSSPFIVKSSNDK
FNVLLSVKNKKDSAYNTRVLVCYSSNIIFAGIEGIQKDSCESNHNITCRVGYPFLKSEEE
ISFRIAFQFNVTYLLEVATVQVCVTSDSEEPPETVADNRGHISIPVKYETGLIFSRVLKR
SHFTILANDTVPAVINTTENIGDEVNINYKIEKGEHFPVPQLSLEILFPILTSVKNPILY
LTELSYSDNADCQTSHPVDPLKINSGEPFVLSKIKEPTKDIVMDCETHNCVSINCSLDPS
GISQVNVSLRIWKSTFIKASISSLTLTVKALLQSKNSSLILRRENEKLENKITIVKDSQS
SGVPLWVILLSIIIGLLILALLIFTLWKLGFFKRPLKKKMAK
NT seq 3729 nt   +upstreamnt  +downstreamnt
atgtgcagaaaaactgctaccaacaaacaggaaatgcctaacccggcggctgccgctgct
gcagaggcagacatcaaggcaacggcggcagcagcgccccgagctgcgctccctgggccg
gcgccgggaggaggctcgccccggcggtctgctgccccgcgcgctccccctgcagccatg
ggctcccggcccttccgcggcagaaacccaggtgtcgctgcctcgtgctggactctgaca
gctctgattcacctcagtgcatccttcaatgttgatgtgaaaaatgcgatgagttttaat
ggccctgtagaggacatgtttgggtatactgttcaacagtatgaaaatgaagaaggaaaa
tggatcttaattggttctccattagttggccagcccaagaagagaacaggagatgtctat
aaatgccgtgttggaaatggcaatcaatcaccttgcataaaactgaatctaccagctgat
acttcagtacctaacgtcatggaagtaaaagagaacatgacccttggaacaactttagtg
actaacccaaaaggaggctttctggcatgtgggccactttatgcttataaatgtggacgt
ttgcactacacaactggcatctgttctaatgtcagctctacatttcaagttgtaaatgcc
attgcaccatctgtacaagagtgtaagacccaactggatattgtcattgttcttgatggt
tctaacagcattcacccgtggaagagtgtcacagaatttttagacagtcttttgaaaaat
atggacattggcccacagcaaacgcaggttggcattgttcaatatggacaaactgtagtc
catgaattttacctcaatacatactcaacaacagaagatgtacagaaagcagccaagaaa
atagttcagaggggtggtacccaaactatgacagcacttggaatagatacagcaaggaat
gagtctttcacagaggctcatggtgcacgaagaggagtacagaaagtaatggttattgtg
actgatggggaatcacatgacaactacagattagcagatgtgattaaggattgtgaaaat
gaaaacattcagcggtttgctattgctattcttggaagctacaaaagagaaaatttaagt
cctgaaaaacttttggaggaaataaaatcaattgcaagtgagcctactgaaaagcatttc
ttcaatgtctccgatgaattagcccttgttactattgttgaagcacttggagagaggata
tttgccctggaagctacaacagaccagcaggcatcctcatttgaaatggaaatgtcacaa
gctggtttcagtgctcattattctcaggactggatcatgcttggcgcagttggagcatac
gactggaatgggacagtggtcatgcaaaaagacaatacagtttttatgccaagaaataat
acctttcgtgacgagtctgaaaaaaatgaacctcttgcagcttatttaggatatacagta
aattctgcaacaacacctgaaggagttctatacattgctggacaacctcgatataatcac
acaggccaagttattgtttataaaatggaaggaagagatgtaaaaataatacagaggtta
aaaggaaaacaaattggatcatattttgggagtgttattactacagtagacatcaacaaa
gattcatttacagatattcttctagttggtgctccaatgtatatgggaactgaaaaagag
gaacaaggaaaagtatatgtgtattctttgaacaagacaacatttgagtatcaaatgagc
ctcgaacctataaagcaaacttgctgttcattattaaaacataattcctgcaaaactcac
aagaatgaaccttgtggtgctcgctttggaactgcaattgcctcagtaaaggacctcaac
cttgatggatataatgatattgtgataggatctcctttagaagatgatcatcggggagct
gtatacatttatcatggcgatggcaccacattaaggaaagaatatgcacagcgtattgca
tcaggcggagatggggagaaaatgaaattttttggtcagtctatacatggagaaatggat
ttaaatgatgatggtctaatagatgtcactattggaggccttggtggtgctgccctcttc
tggtcgcgtgatgtggctgaagtaaatgtttccatgactttcacacctgacaaaatcaat
atccaaaagaagaattgtaagatggataaaaaagaaacagtatgcataaatgccaccatt
tgttttgaactcagactaaagtctaaggagcatacagtatatgaatctagtatacagtat
cggcttacccttgattcacagagacagatatctcgaagcttgttcatgggaagcaaggaa
aggaagatacaaaaaaatatcactgtcaaagggtcagaatgtagtaaacataacttctac
atgttggacaagccagattttctgcactctgtcaaggttttgctggagttcaatttttct
gatccagagagtggtcctgttcttgatagcaaccttccaaactcagtatatgaatatatt
cctttcaccaaagattgtggactcaaaaacatatgtactactgacctggttctgaaagca
aatgcaagcatagctggtaacagctcttctccattcattgtaaaatcaagcaatgacaag
ttcaatgtcctactatctgtcaagaataaaaaagacagtgcctataataccagagtttta
gtttgctattcttcaaatattatttttgctggaattgagggtatacagaaagacagttgt
gaatccaatcacaatatcacttgcagagtggggtacccttttctaaaatctgaagaagag
atttctttcagaatagcatttcagttcaatgttacttaccttctagaagtggctactgtt
caggtgtgtgtaacaagtgacagtgaagaaccacctgaaactgtagctgacaacagagga
cacatttcaattccagtaaaatatgaaacaggattgatattttcaagggttttaaaaaga
tcccactttacaattctagcaaatgatacagttcctgctgttattaatacaactgagaac
attggggatgaagttaacataaattataagattgaaaaaggtgaacactttccagtgccg
cagctttcactggagattttattccccatcttaacttcagtcaaaaacccaattctctac
ctaactgagctgtcatattcagataacgcagactgccaaactagtcatcccgtagatcca
ttaaagatcaactctggggaaccatttgtgttgtccaaaataaaagaacctacaaaagat
atagttatggactgtgaaacacacaactgtgtatctattaattgtagtctggatccatct
ggtatatctcaagtgaatgtttcattaagaatatggaaatctacttttataaaagcaagc
attagcagtttaacactcacagtaaaagcgttacttcaaagtaaaaactcctcactgatt
ttacgaagagaaaatgaaaaattagagaacaagattacaattgtaaaagacagtcaatcc
agtggtgttccattatgggtcattttactcagcattattattgggttattgattcttgca
cttcttatatttacattgtggaagcttggatttttcaaaaggccactaaagaagaaaatg
gcaaaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (12)   
   Pfam (12)   
All databases (49)   

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