KEGG   Alligator sinensis (Chinese alligator): 102382802
Entry
102382802         CDS       T02922                                 
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
  KO
K03141  transcription initiation factor TFIIH subunit 1
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn03022  Basal transcription factors
asn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:asn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102382802 (GTF2H1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102382802 (GTF2H1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:asn03021]
    102382802 (GTF2H1)
   03400 DNA repair and recombination proteins [BR:asn03400]
    102382802 (GTF2H1)
Transcription machinery [BR:asn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     102382802 (GTF2H1)
DNA repair and recombination proteins [BR:asn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     102382802 (GTF2H1)
SSDB
Motif
Pfam: PH_TFIIH BSD
Other DBs
NCBI-GeneID: 102382802
NCBI-ProteinID: XP_006022066
UniProt: A0A1U7S039
Position
Unknown
AA seq 548 aa
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSMNAVDSSAAHNKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNLTEREFWTRFFQSHYFHRDRVNTGSKD
LFAECAKMDEKGLKTMVSQGVKNPLLDLMALEDKSLDEGYGVASAPSTSNSSKSIKENSN
AAIIKRFNHHSAMVLAAGLRKQEAHNDHYSETSSTDGNSRDSDFFQPPMKKVKLQESIEY
EDLRKNNSIKTIALNLKKSDRYYHGPTPIQSQQYATSQDIINSFHSIRQEMEAYVPRLTQ
VLSSGDAASTITALSPGGALMQGGTQQAINQMVPNDVQSELKHLYVAAGELLRHFWSCFP
VNTPFLEEKVMKMRSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKFHMWQ
TRRMLKKT
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggcaacctcttctgaagaagtgttactgatagtgaagaaggtacgtcaaaagaagcaa
gatggggctctctaccttatggctgaacggatagcctgggcacctgaaggcaaagaccga
ttcacagtcagccatatgtacgcagacataaaatgccagaaaattagtcctgaaggaaaa
gctaaaattcagcttcagctggtattgcatgcaggggacacaaccaacttccacttctcc
aatgaaagcacagcagtgaaggaacgagatgcagtgaaggaccttcttcagcagctgttg
cccaaattcaagaggaaagctaataaggaacttgaagaaaagaacagaatgctgcaagaa
gatcctgttttgtttcagctttataaagaccttgttgtgagccaggtaatcagtgctgag
gaattctgggccaaccgtttaagcatgaatgcagtggatagttctgcggcacataataag
caggatgtgggcatctctgcagcatttctggctgatgttcggcctcaaacggatggttgc
aatggtctgaggtataacttaacctccgatatcattgaatccatatttagaacatatccc
gcagtaaaaatgaaatatgcagaaaatgttccacataacctgactgaaagggaattctgg
acacgatttttccaatcccactatttccatcgggatagggtgaacacaggttcaaaagat
ctctttgctgaatgtgccaaaatggatgagaaagggttaaaaacaatggtctctcaagga
gtgaaaaatcctctgttagatttaatggccttggaagataaatctttagatgagggttat
ggtgttgcctctgcaccatccacatcaaactcatcaaaatcgataaaagaaaatagcaat
gctgccattataaaacgctttaaccatcacagtgccatggttcttgcagctgggctcaga
aaacaagaagcgcacaatgatcattatagtgagaccagcagcacagatggaaactccaga
gactcggatttctttcagccaccaatgaaaaaggtgaagttacaggaatctattgaatat
gaagatttaagaaagaataatagcattaaaactattgcactaaacctaaagaaatctgat
cggtattatcatggtccaactccaattcagtcacagcagtatgcaaccagtcaggatatt
attaattcttttcatagtattagacaagaaatggaagcctatgtacccagactaactcag
gttctttcaagtggtgatgctgctagcaccatcacagccctatcacctgggggagcactt
atgcagggtggaacacagcaagccataaaccagatggtgccaaatgatgttcagtctgaa
ctgaaacacttgtatgtggctgcaggggagctactgcgacacttctggtcctgctttcct
gttaatacaccattcctagaagaaaaggttatgaaaatgaggagtaatttggaaagattt
caagttacaaagctctgcccattccaagaaaaaatccggagacaatatttaagcacaaac
ttggtaagtcatatagaagagatgttgcagacagcctacaataagttccacatgtggcaa
acccggcgtatgttaaagaaaacgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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