KEGG   Alligator sinensis (Chinese alligator): 102384815
Entry
102384815         CDS       T02922                                 
Symbol
DDX41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41 isoform X2
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:asn00001]
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    102384815 (DDX41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:asn03041]
    102384815 (DDX41)
Spliceosome [BR:asn03041]
 Complex C
  Other components
   Complex C specific factors
    102384815 (DDX41)
SSDB
Motif
Pfam: DEAD Helicase_C zf-CCHC ResIII UTP25 SecA_DEAD
Other DBs
NCBI-GeneID: 102384815
NCBI-ProteinID: XP_006035662
UniProt: A0A1U7SPQ0
Position
Unknown
AA seq 496 aa
MSVKEMAKGITYDDPIKTSWRAPRHILGMSEARHERVRKKFHILVEGEGIPPPIKSFKEM
KFPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQ
EKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDGLPPLRCALCIGGMSVKEQ
METIKHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFK
GQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVVQEVEYVKEEAKMVYLLE
CLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRDGKKDVL
VATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLM
DLKALLLEAKQKVPPVLQVLHCGDETMLDIGGERGCAFCGGLGHRITDCPKLEAMQTKQV
SNIGRKDYLAHSSMDF
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgtccgtgaaggagatggcaaagggcatcacgtacgacgaccccattaaaaccagctgg
cgggcaccgcgccacatcttgggcatgtcggaggcgcggcacgagcgcgtgcgcaagaag
tttcacatcctggtggagggtgagggcatcccaccgcccatcaagagcttcaaggagatg
aagttccctgcagccatcctgcggggcctgaagaagaaggggatccagcagccgacaccc
atccagatccagggcatccccaccatcctctctggcagggacatgattggcattgcgttc
accggttccgggaagactctggtgttcaccctcccggttattatgttctgcctggagcag
gagaagaggttgccgttctccaagagggaagggccctatgggctcatcatctgcccctcg
cgggagctggcccggcagacccatggcatcctggagtactactgccgcctgctgcaggag
gatgggctgcccccactgcgctgcgctctctgcattgggggcatgtccgtcaaggaacag
atggagaccatcaagcatggcgtgcacatgatggtggccacgcccgggcgcctcatggat
ctgctgcagaagaagatggtgagcctggacatctgccgctacctggcgctggatgaggct
gaccgcatgatcgacatgggctttgagggagatatccgcaccatcttctcctacttcaag
ggccagcggcagaccctcctcttcagcgccaccatgcccaagaagatccagaattttgcc
aagagtgccctggtgaagcccatcaccatcaacgtggggcgagcgggagcagccagcctg
gatgtcgtgcaggaggtagagtacgtgaaggaggaggccaagatggtgtacctgcttgag
tgcctgcagaaaactccaccgcccgtgttgatctttgcggagaagaaggcagacgtcgac
gcgatccatgagtacctgctgctcaagggtgtggaggccgtagccatacatggagggaaa
gaccaagaagagcggacaaaagccatcgaggccttccgggacgggaagaaggatgtcctg
gttgccacggacgtggcctccaagggcctggacttcccggctatccagcacgtcatcaac
tatgacatgccagaggagatcgagaactatgtgcaccgcattgggcgtacgggccgctcg
gggaacacgggcatcgccaccaccttcatcaacaaagcctgcgacgagtcggtgctcatg
gacctgaaggcgctgctgctggaggccaagcagaaggtaccacctgtgctccaggtgctg
cactgcggggacgagaccatgctggacatcggaggggagaggggctgtgccttctgcggg
ggactgggccatcgcatcacagactgccccaagctggaagccatgcagaccaagcaagtc
agcaacatcggccgcaaagactacctggcccacagctccatggacttctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

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