KEGG   Alligator sinensis (Chinese alligator): 102386855
Entry
102386855         CDS       T02922                                 
Symbol
COL9A2
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(IX) chain
  KO
K08131  collagen type IX alpha
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn04510  Focal adhesion
asn04512  ECM-receptor interaction
asn04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:asn00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102386855 (COL9A2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102386855 (COL9A2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102386855 (COL9A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:asn00535]
    102386855 (COL9A2)
Proteoglycans [BR:asn00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   102386855 (COL9A2)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 102386855
NCBI-ProteinID: XP_025068637
UniProt: A0A3Q0HAN5
Position
Unknown
AA seq 662 aa
MPGVASQHGGKEGSLYARGFQGDKGPPGAAGSPGSKGEPGPPGPDGPPGKAGIDGLTGAK
GEPGPIGRPGPKGQPGLLGPPGLPGPSLPGPPGPPGQVGLPGEIGALGPKGDPGPDGPRG
PPGPPGRPGPPGHIQGLEGSADFLCPTNCPPGPKGPQGLQGLKGHRGRPGALGESGRQGR
PGPKGDVGVSGEQGIPGPPGPLGPRGYPGMEGPKGEMGPSGYKGMIGSIGASGKPGEEGP
KGPPGGAGEKGDIGGRGIRGPQGDLGPKGENGLPGIDGKDGTPGIPGVKGSAGQPGRPGP
PGHRGMAGLPGQSGTKGGPGAKGEPGPRGLAGITGPSGQMGEPGPPGEQGPQGVPGLKGD
RGERGPVGPQGVQGKVGSKGEQGPPGIPGSQGLPGVKGDKGFPGKIGSKGGIGDPGVEGL
PGEKGEKGESGEPGPKGQQGIRGEPGFAGPSGDAGSPGVRGYPGPPGPRGLNGERGVPGM
PGKACRXGRDAGDQHIVDVVLKMLQEQLAEVAVSAKRAALGEVGVMGLPGPPGPPGPPGE
QGLHGPPGPRGIPGILGAMGQIGNTGPKGKRGEKGERGDVGRGHQGMPGPPGIPGLPGIP
GHALNGKDGERGPPGSSGQPGRPGLPGPAGLPGFCEPAACLGASAYASARLTEPGAVKGP
MY
NT seq 1989 nt   +upstreamnt  +downstreamnt
atgccaggggtggcttcacagcacgggggcaaggagggatcactctatgctagaggtttc
caaggtgacaagggcccgccgggcgctgccgggtccccgggctccaagggggaaccagga
cctccgggcccagatgggcctccagggaaggcaggcattgatggcctgacaggagcaaaa
ggggaaccagggcccatcggacgtccaggacctaaaggccagcctggacttctagggcct
ccgggactccctggcccgtcgctgccaggaccgcctgggcctccaggtcaggttggactt
cctggggaaatcggtgccttgggacctaagggggatcctggacctgatggaccacgaggc
cccccaggaccccccggaagacctggcccaccgggacacatccaaggcctagaaggcagt
gctgacttcttgtgtccaaccaactgcccgccaggacccaaaggcccgcagggactgcag
ggcctgaagggacacagaggccgccccggtgcccttggggagtcgggcagacagggcagg
ccgggtcccaaaggcgacgtgggtgtttccggcgaacaaggcatcccaggccctccaggt
cctctgggacccaggggttaccctggcatggagggtccgaaaggcgagatgggacccagt
ggttataaaggaatgattggctctattggagcttctggaaagccgggtgaggagggaccc
aaagggccacctgggggagccggcgagaagggagatattggtggccgtggcatcagggga
ccccagggggacctgggccccaagggggagaatggtctccctggcattgatggtaaagat
ggcacccccggcatccctggtgtgaaggggagcgcagggcaaccgggccgcccaggacca
ccggggcaccgaggaatggctggtttaccaggccaatctggcaccaaaggcggcccagga
gcaaagggtgagccaggtccccgcgggctggcaggaattaccgggccttcggggcaaatg
ggtgagcccggacctccaggtgagcaagggccgcaaggtgtccctgggctgaagggcgat
cggggtgagcgtggccctgtgggtccccaaggtgttcaggggaaagtgggatctaaaggg
gagcagggtcctcccggcatcccaggatcccaaggcctgccaggtgtcaaaggagacaag
ggctttccaggaaaaattggttccaaaggtggcattggagaccctggcgtggaaggtctt
cccggggagaagggggagaagggtgaatcaggtgagccaggaccaaaggggcagcaaggc
atccgtggtgagcctggctttgctggtccttctggtgatgctggctcacctggcgtaaga
ggttacccaggaccaccaggccctcgtgggctcaacggagagcgcggcgtgccaggaatg
cctggcaaggcatgccggtgaggccgggatgctggggaccagcacattgttgatgtggtc
ttgaagatgttgcaagaacagctggcagaggtggcagtgagtgccaagagagcagcttta
ggtgaagttggtgtgatgggactgcctggtcccccagggccccctgggccacctggtgag
caaggcctgcatggaccccctggaccacgtggcatcccgggcattttaggagccatgggg
cagattggcaacactgggcccaaagggaagcgaggagagaaaggagagcgtggagatgtt
ggacgtggacatcagggcatgccgggacctccgggaatcccaggtcttcctggcatccct
ggccatgccctcaatggcaaagatggagagcgaggccctcctggatcctctgggcaaccg
ggacgacctgggttacctgggccggctggtctccccggattctgcgagcccgctgcctgc
ttaggagcctctgcttatgcctcggcacgtctaactgagccaggagctgtcaaaggacct
atgtactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (48)   

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