KEGG T04186: WL1483

Aeromonas schubertii: WL1483_1585

Entry

WL1483_1585       CDS       T04186

Symbol

rsmF

Name

(GenBank) rRNA (cytosine-C(5)-)-methyltransferase RsmF

K11392

16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]

Organism

asr Aeromonas schubertii

Brite

KEGG Orthology (KO) [BR:asr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:asr03009]
    WL1483_1585 (rsmF)
Enzymes [BR:asr01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.178  16S rRNA (cytosine1407-C5)-methyltransferase
     WL1483_1585 (rsmF)
Ribosome biogenesis [BR:asr03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    WL1483_1585 (rsmF)

SSDB

Motif

Pfam:

Methyltr_RsmB-F Methyltr_RsmF_N YebU_pre-PUA_dom Methyltranf_PUA Methyltransf_31 FtsJ Methyltransf_25 Methyltransf_4 NSUN5_fdxn-like Methyltransf_23

Other DBs

NCBI-ProteinID:

ALP41004

UniProt:

A0A0S2SH48

Position

complement(2173442..2174869)

AA seq 475 aa
MHQNSYIPDAFIAHIAKIMPSHLLMEDFLASCRTPLRRSIRVNTLKIPVEVFVERMQARG
WTLEPVPWCHTGFWLTRPESETVPLGNTAEHLAGLFYIQEASSMMPVTALEEALENAEMV
LDAAAAPGSKTTQMAALMGNHGMLIANEFSASRIKGLFSNIQRCGVTNVALTHFDARVFG
QWLPETFDAILLDAPCSGEGTLRKDEDALRNWSIESINDIAATQKALLESAFHALKPGGV
IVYSTCTLSHQENQEVCEHIKARFGDALAFESLADLFPGAERSCTAEGYLNIWPQIYDSE
GFFVARLRKHASVPNDIFKPGKLGKFPFSPLSPKEGDTLRQDIEQAYGVTLRGKLYGRDG
EIWLFPEPVEQVIGKIRFDRIGFKLAETFKKGYRLTHEWALAYGDGASRGTLELDVELAR
EYMMGRDVRPEGETGQGEVVVRYQGHALGLGKWVGYRLKNGLPRDLVRDGNLFEQ

NT seq 1428 nt +upstreamnt +downstreamnt
gtgcatcagaacagctatattcccgacgctttcatcgcccatatcgccaagatcatgccc
agtcacctcttgatggaggattttctggccagctgtcgcacccctctgcgccgcagcatt
cgggtcaacaccctcaagatcccggtcgaggtctttgtcgagcgtatgcaggcccgcggc
tggactctggagccggtaccctggtgtcataccgggttctggctgacccgtcccgagagc
gaaacggtgcctctggggaacacggccgaacacctggccgggctcttctacattcaggag
gcgagctccatgatgccggtcacggcccttgaggaagccctcgagaacgccgagatggtg
ctcgatgcggcggcggctcccggctccaagaccactcagatggcggccctcatgggtaat
catggcatgttgatcgccaacgaattttcggccagtcgtatcaagggcctcttctccaac
attcagcgctgtggggtcaccaacgtggccctcacccatttcgatgcaagagtgtttggt
cagtggttgcccgagacgtttgatgcgatcctgctcgatgccccctgctcaggggaaggg
accctgcgcaaggatgaggatgccctgcgtaactggagcatcgagagcatcaacgacatt
gccgccacccaaaaggccttgcttgaaagcgccttccacgccttgaagccaggcggcgtc
atcgtctactccacctgtaccctgagccatcaggagaatcaggaggtgtgcgagcatatc
aaggcacgttttggcgatgccctcgcctttgaatcccttgccgatctcttcccgggggcc
gagcgttcctgcaccgccgagggctacctgaacatctggccgcagatctacgacagtgaa
ggcttcttcgtggcgcggcttcgcaaacacgccagcgtgcccaacgatatcttcaagccg
ggcaaactcggcaagtttcccttctctcccctctcgcccaaggaaggcgacacgctgcgc
caggatattgagcaggcctatggggtcaccctgcgcggtaaactctatggccgtgacggt
gagatctggctcttccccgagccggttgagcaggtgatcggcaagatccgtttcgaccgt
atcggcttcaagctggccgagaccttcaagaagggctatcgcctcactcacgagtgggca
ctagcctatggagatggggccagccggggcacgctggagctcgacgtggagctggcccgg
gaatacatgatggggcgcgatgtgcgtcccgaaggggaaacaggtcagggcgaggtggtg
gtccgctatcagggtcatgccctgggtcttggcaagtgggtgggctaccgcctgaaaaat
ggtctgccgcgcgatctggttcgggatggcaatctgttcgagcagtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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