KEGG T02642: Asulf

Archaeoglobus sulfaticallidus: Asulf_00524

Entry

Asulf_00524       CDS       T02642

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

ast Archaeoglobus sulfaticallidus

Brite

KEGG Orthology (KO) [BR:ast00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ast03032]
    Asulf_00524
   03400 DNA repair and recombination proteins [BR:ast03400]
    Asulf_00524
Enzymes [BR:ast01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Asulf_00524
DNA replication proteins [BR:ast03032]
Prokaryotic type
  DNA Topoisomerases
   Asulf_00524
DNA repair and recombination proteins [BR:ast03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Asulf_00524

SSDB

Motif

Pfam:

Topoisom_bac Toprim zf-C4_Topoisom HMBD Toprim_4

Other DBs

NCBI-ProteinID:

AGK60547

UniProt:

N0BE99

Position

488465..490477

AA seq 670 aa
MAGKWLIITEKDNTARRISSILFKNVKKVRKKGINVYQADNTYVIGLKGHIVQLDFPEEY
NNWSKVPLKSLLRADIIKKVTEKNLVEVLKSIAKEIDRVTIATDYDREGELIGVEALEII
RNENPNVRFDRVRYSAITPSDIKKAFSSPTEVDFNLAKSAEIRQKIDLIWGAVLTRLISL
SSGRLGKDFLSVGRVQSPTLRLIVEREEEIKNFKPKKYWEIFASFRKGEEVFQCKHEKRF
EDKEQAEKAFAKVGDKGVVVSFEKKERAEKPPTPFNTTEFLREASKFMSVNKAMMVAESL
YMSGYISYPRTDNTVYPKTINLRAIVEKLTQGEFKKEAEFVLSQEKLRATRGKKESKDHP
PIHPTAVAKKDELSKDEWVIYELVVRRFLATLSPDAIWVVRRGKIDSSGEIFRFNGRKLI
EEGWRKIYIYSKAEEVPVPDLQEGEVLDIVSKKLEEKETKPPNRYSSGSLIKEMEKLGLG
TKSTRHEIINKLYSRKYVYGNPLRPSEIGMAVINALKKEAETITQPDMTSKLEEDMYAIA
EGKLSDEYVVEESIRFLDEILSNLDRESLSKTLRDGIRKDKIVGKCPKCSRDLVIRKKKG
DSRRFIGCSGYPDCNFTLPLPQKGTIYITSKLCEKHEIKRIKIRTKKGYWDLGCPYCNYL
EWQEKNKKVN

NT seq 2013 nt +upstreamnt +downstreamnt
atggctggaaaatggctcataataacagaaaaggacaatacagcgagaagaatttcttca
attctttttaagaatgttaaaaaggtaaggaagaagggaataaatgtttatcaggctgat
aacacatatgttatcggattgaagggtcacattgtgcagctcgattttccggaggagtac
aacaactggagcaaggttccgctcaagtctctgctgagggctgatattatcaagaaggtg
actgagaagaacctcgttgaagtgctgaaaagcatcgctaaggagatagacagagttacg
atagcaaccgactacgatagagaaggagaactcattggtgttgaagctctggagataatc
agaaatgagaatccgaatgtcaggtttgacagagtgagatactcagcaataacaccatcg
gacataaaaaaggcattctccagccccacggaggttgactttaacctcgcaaagtctgct
gagatcagacagaagatagacctgatatggggggctgtgcttacaaggctgatctcactg
tcatcgggaaggctgggaaaggactttctgagtgttgggagggttcagtctccaactctg
aggcttatagttgagagggaggaggaaataaagaacttcaagccgaaaaagtactgggag
atttttgccagcttcaggaagggtgaagaggtattccagtgcaagcatgaaaagaggttc
gaagataaggagcaggcagagaaggcttttgcgaaagttggagacaaaggtgttgtggta
agtttcgagaagaaagaaagggctgagaaacctccaacacccttcaacaccactgaattt
ttgagagaggcttcaaagttcatgagcgtgaacaaggcgatgatggtagctgagtctctg
tacatgtcaggatacatatcatatccaaggactgacaatactgtttatccaaagactata
aatctgagggctattgttgagaagctgactcagggcgagtttaaaaaggaggcggagttc
gttctctcgcaggaaaagctcagggcaacgaggggaaagaaggagagcaaggaccaccca
cccattcatccaactgcggtagcaaaaaaagatgagttgagcaaggatgaatgggtgatt
tatgagctggttgtcagaagatttctcgcaacgctgtctccggatgccatatgggttgta
aggagaggaaagatagattccagtggtgagatattcaggttcaatggcaggaagctaatt
gaagagggatggaggaagatatacatatactcgaaagctgaagaggttccggttccagac
cttcaggaaggagaggtgctggacatagtcagcaagaagctggaagagaaagagaccaaa
cctccaaacaggtactcttctggaagtctgataaaggagatggagaagctcggactcgga
acaaaatcaacaagacatgaaataataaacaagctttattcgagaaagtatgtttacgga
aatcccctcagaccatcggaaataggtatggccgttataaacgccctgaaaaaagaggca
gaaactataactcagccagatatgacctcaaagcttgaggaagacatgtatgcgatagct
gaaggaaagctgagcgatgagtatgttgttgaggaatcaatacgattccttgatgaaatc
ctgtcgaatcttgacagagaatccctctcgaaaacattgagagatggaatccggaaggac
aaaatcgttggaaaatgcccgaaatgttcgagggatctcgttataaggaaaaagaaggga
gactcaaggagatttattggatgcagcggatacccagactgcaacttcacgctaccgtta
ccccagaagggcacgatatacataacatccaagctctgcgagaagcatgagataaagagg
atcaaaatccggacaaagaagggctactgggatctcggatgtccatactgcaactatctt
gagtggcaggaaaagaacaagaaagttaattaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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