KEGG   Actinobacillus succinogenes: Asuc_1066
Entry
Asuc_1066         CDS       T00558                                 
Name
(GenBank) exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
asu  Actinobacillus succinogenes
Brite
KEGG Orthology (KO) [BR:asu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:asu03016]
    Asuc_1066
Enzymes [BR:asu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     Asuc_1066
Transfer RNA biogenesis [BR:asu03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Asuc_1066
SSDB
Motif
Pfam: RNB OB_RNB S1 CSD2 DUF2274 TRAM
Other DBs
NCBI-ProteinID: ABR74432
UniProt: A6VN85
Position
complement(1169827..1171806)
AA seq 659 aa
MFQNNPLLSQLKQQLHDSKPHVEGVVKGTDKAYGFLETDKETFFIAPPAMKKVMHGDKIK
ATIETIGDKKQADPEELIEPMLTRFIAKVRFNKDKKLQVLADHPNINQPIGAAQTKAVKE
ELHEGDWVVATLKTHPLRDDRFFYAQIVEFICRAEDEFAPWWVTLARHQQSRYPVQGQDS
YKMLDPQTRKDLTALHFVTIDSESTQDMDDALYIEPLEQNGEQTGWKLTVAIADPTAYIA
ADSQIEKDARQRCFTNYLPGFNIPMLPRELSDELCSLMENETRAALVCRLQTDLQGELQG
KPEFLLADVQSKAKLAYNRVSDYLEQAEGAWQPENETTKQQIHWLHRFALTRINWRKTHG
LLFKEKPDYSFVLADNGHVQEIKAEYRRIANQIVEESMIVANICCAHYLADNAKTGIFNT
HAGFDKKFLPNAHHFLMTNLSNAQNQDELTVRYSVENLATLEGYCRMRHDIEPIDGDYLE
FRLRRFLTFAEFKSELAPHFGLGLTGYATWTSPIRKYSDMVNHRLIKACIAEQACLKPSD
DILTRLQEARKQNRMVERDIADWLYCRYLADKVENKPEFQAEVQDCMRGGLRVQLLENGA
SVFVPASTIHPNKEEIQVNSDELAFYINGERRYKIGDIVNIQLTEVKEETRSLIGNLVL
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgtttcagaataatcctttattatctcaattaaaacaacaactgcacgacagcaaacca
catgtcgaaggcgtagtgaaaggtacggataaagcctacggtttcttggaaaccgataag
gaaaccttttttattgcgccgccggccatgaaaaaagtgatgcacggcgataaaatcaaa
gcgacaatcgaaaccatcggtgataaaaaacaggccgacccggaagaattaatcgaaccg
atgttaacccgttttattgccaaagtgcggttcaataaagacaagaaattgcaagttttg
gcggatcacccgaacatcaatcaaccgatcggcgcggcacaaaccaaagcggtaaaagaa
gaattgcatgaaggcgattgggtggtcgccaccttaaaaacccacccgctacgggacgat
cgttttttctatgcgcaaattgtagaatttatctgccgggccgaggacgaatttgcgcct
tggtgggtcactctggcacgtcaccagcaatcccgttatcccgtacaggggcaagacagc
tataaaatgctcgacccccaaactcgtaaagatttgaccgcccttcatttcgtcaccatc
gacagcgaaagcacacaggatatggatgacgcgctttatatcgaaccactcgaacaaaac
ggtgaacaaacgggatggaaactgaccgtagcaattgcggatcctaccgcatatattgcc
gctgattcgcaaattgaaaaagatgcccgtcagcgctgcttcaccaattatttgcccggt
tttaacattccgatgctgcctcgcgagctttccgacgaactctgttcgctaatggaaaat
gaaacccgtgccgcgctcgtgtgtcgtttacaaacggatttgcaaggcgaattacaaggt
aaacctgaatttctgcttgccgatgtacaatctaaggcaaaattagcttacaaccgcgtt
tccgattatttagaacaagcggaaggcgcctggcaacctgaaaacgaaacaacgaaacaa
caaattcattggttgcaccggtttgcgttaacccgtattaactggcgcaaaacccacggt
ttgttatttaaagaaaaaccggattacagtttcgttttggcggataacggtcacgtgcag
gaaattaaagcggaataccgtcgtattgccaatcaaatcgtggaagagtccatgattgtc
gccaatatttgctgcgcacattacctggcagataatgccaagaccgggattttcaacacc
catgccggattcgataaaaaattcctgccgaatgctcaccattttttaatgacgaattta
agtaatgcacaaaaccaggatgagttgacggttcgttattccgtagaaaacttagccacg
ctggaaggttattgccggatgcgccacgatattgaacccattgatggtgattatttagaa
ttccgcttacgccgcttcctcacctttgcggaatttaaatcggaactcgcgccgcacttc
ggcttgggtttaacgggttatgccacatggacgtcgccaatccgcaaatattccgatatg
gtgaatcaccgtttgattaaagcctgtattgccgagcaagcatgcttgaagccaagcgat
gacattctcactcgcctgcaggaggcgcgcaaacaaaaccgcatggtggaacgtgacatt
gccgattggctgtattgtcgctatttggcggacaaagtggaaaacaagcctgaattccaa
gcggaagttcaagactgcatgcgcggcggattacgggttcaattgctggaaaacggcgcc
agcgtttttgtaccggcatccaccattcatccgaataaagaagaaattcaggtgaatagc
gatgagctggcgttttatatcaacggcgaacgacgttacaaaatcggcgacatcgtgaat
attcagttaacagaagtcaaagaagaaacccgtagtttaatcggtaatttagtgttataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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