KEGG   Alkalitalea saponilacus: CDL62_02305
Entry
CDL62_02305       CDS       T04906                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
asx  Alkalitalea saponilacus
Pathway
asx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:asx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CDL62_02305 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:asx03019]
    CDL62_02305 (pnp)
   03016 Transfer RNA biogenesis [BR:asx03016]
    CDL62_02305 (pnp)
Enzymes [BR:asx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     CDL62_02305 (pnp)
Messenger RNA biogenesis [BR:asx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CDL62_02305 (pnp)
Transfer RNA biogenesis [BR:asx03016]
 Prokaryotic type
  tRNA degradation factors
   CDL62_02305 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 KH_1 PNPase KhpA-B_KH S1_2
Other DBs
NCBI-ProteinID: ASB48057
UniProt: A0A1T5EQJ6
Position
645057..647192
AA seq 711 aa
MIKSIEKVIDLGDGRSIVIETGKLAKQADGSVIVRMGNTYLLATVVSAQEAKPGTDFMPL
SVEYREKFSAIGRFPGGFQKRESRPSDYEILVSRLVDRALRPLFPEDYHADTFVNVSLIS
ADKESTPDALAGLAASAALAVSDIPFNGPISEVRVARIDGQLVVNPTVSQMQKADLDIIV
GASYDNIMMVEGEMDEVSEAELLEAMKVAHDAIKVQCKAQMELVEMLGKKPTREYNHEEN
DEELREKVWKETYDKAYAVAKKANPNKLERLNDFSQVVKDFIEANYADVEESEIPMDLIK
KYYHDVEKEAVRRFMLDENVRIDGRKMDEIRPIWCEVDCLPGPHGASIFTRGETQSLTTV
TLGTKMDEKIVDDVLNRSIDRFLLHYNFPPFSTGEARPYRGVGRREIGHGNLAMRALKGM
IPADNPYVIRVMSDILESNGSSSMATVCAGTLALMDAGIKIKAPVSGIAMGLITDTKSDK
YVVLSDILGDEDHLGDMDFKVTGTQKGITATQMDIKVAGLSYEILEKALEQAKAGRLHIL
EKLIETMPETRADYKPHAPRIVSIKIPKEMIGAVIGPGGKIIQEIQASTGTILTITEEGM
FGQVDIAADNKEAIDKALDRINAIVAIPEMGKVYKGKVKSIVPFGAFVEILPGKDGLLHI
SEIDWKRIEKTEDVLKEGEEIEVKLIEIDSRSGKLKLSRKVLLPRENDKSK
NT seq 2136 nt   +upstreamnt  +downstreamnt
atgattaagtcaattgaaaaagtgattgatcttggcgatggaagatcaatcgtgatagag
accggaaagttagccaaacaggctgacggctctgtcattgtacgcatgggtaacacatac
ctacttgcaactgtggtatctgcacaggaagcaaaacccggcactgattttatgccgttg
tctgttgaatacagagaaaaattttcagccatagggcgtttcccaggaggtttccaaaaa
agagaatctcgtccttcagactatgaaattcttgtctcaaggcttgtggacagagcatta
cgtcctttgttcccggaagattatcatgcagatactttcgtgaatgtctcattaatttcg
gctgataaagagagtactcccgatgctttggcaggactagcagcatcagctgctttagct
gtttcagacattcctttcaacgggccaatttctgaagtgcgtgttgcgcgcatagatgga
cagttggtagtcaatcccactgtttctcaaatgcagaaagctgatttggacatcatcgta
ggtgcttcttacgacaacataatgatggtagaaggcgaaatggacgaagtttcagaagca
gaactacttgaggctatgaaagtggctcacgacgctatcaaagtacagtgtaaagctcaa
atggaactggttgaaatgcttggcaaaaagccaacacgcgaatacaaccatgaggaaaac
gatgaagagctacgtgaaaaagtttggaaagagacctatgacaaagcctatgctgttgca
aaaaaggccaatccaaataaacttgaaagactaaacgatttcagccaggtagtgaaagac
ttcattgaggccaattatgccgatgtggaagagagcgaaatcccgatggatttgatcaaa
aagtactaccacgatgttgaaaaagaggctgtacgcagattcatgctcgatgaaaacgtt
cgtatagacggacgaaaaatggacgaaattcgccccatctggtgtgaagttgattgtttg
ccgggccctcatggagcatccattttcacaagaggtgaaactcagtctttaacaactgtt
acacttggaactaaaatggatgaaaaaatcgtggacgatgttcttaacagaagcatcgac
agatttttgctccactacaacttccctcctttctcaaccggagaagccagaccataccgc
ggcgttggccgacgcgaaattggtcacggaaacctcgccatgagagctcttaaaggaatg
attcctgctgataatccgtatgttatcagagttatgtctgacatacttgaatcaaacggt
tcttcatcaatggcaactgtgtgtgcaggaacacttgcattaatggatgcagggatcaaa
attaaagcccccgtttccggcattgccatgggacttatcaccgacacaaaatcagataaa
tatgtagtattgtctgacattcttggcgacgaggatcacttgggtgatatggactttaaa
gttaccggtacacaaaaagggatcaccgccacgcaaatggacataaaagtggcagggctt
tcgtatgaaatccttgaaaaagctcttgagcaggcaaaagctggtcgtttgcatattctt
gaaaaacttattgagaccatgcctgaaacacgtgccgactacaagcctcatgctccaaga
atcgtttcaattaagattccaaaagagatgattggtgcagtaattggccccggaggtaaa
atcattcaggaaatccaagcttctaccggaaccattttgaccattaccgaagaaggaatg
tttggacaggtggacattgcggctgataacaaagaagccattgacaaagcgcttgacaga
atcaacgccattgtagccatacctgaaatgggcaaggtttacaaaggaaaagtgaagtca
atcgtgcctttcggagcttttgttgaaattcttcctggcaaagacggattacttcacatt
tcagaaatcgactggaaacgcatcgaaaaaacagaagatgtgttaaaagaaggcgaagaa
attgaagtaaaattaatcgaaattgattccagatcagggaaactaaaactttcaagaaaa
gttcttcttcccagggaaaatgataaatcgaaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (52)   

Download RDF
DBGET integrated database retrieval system