KEGG   Agrobacterium tumefaciens S33: AWN88_02240
Entry
AWN88_02240       CDS       T04213                                 
Name
(GenBank) peptide ABC transporter
  KO
K02035  peptide/nickel transport system substrate-binding protein
Organism
ata  Agrobacterium tumefaciens S33
Pathway
ata02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ata00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AWN88_02240
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ata02000]
    AWN88_02240
Transporters [BR:ata02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    AWN88_02240
SSDB
Motif
Pfam: SBP_bac_5
Other DBs
NCBI-ProteinID: AMD57096
Position
circular:complement(481997..483562)
AA seq 521 aa
MSRIRSFVLAAMAAAAIAVPASAETLRWGGRADLYSLDPYSVPSTSNLAFLNHIYEGLVR
YGPDFQIEPALATEWKLIDGKTWRFTLRKGVKFHDGADFTADDVVASFTRASDATSPLRG
NIPIYAGVKKVDDYTVDLDVNAPTSLFLNDITNIFIFNAKWLKDNNSEKPTDFASKVDGY
TTMHTNGTGPFKLESRVPDSKTVLVANEGWWDQKKHNLDRIEFVPIASAATRVAALLSGE
IDLIDSAPIQDLPRLESSPNITVKKRTELRTLFIGFNRREKLENGQPNPFNDLRVRQAFE
ASIDRDLINKKVMRGLARPSGSLIAPEIAGYAKSLDTFEPADPAKAQKLLADAGMKNLAF
TYTCMNDESVNEEDICSGVANMLKRGGFQPTIDIAPRSVQSPKRNGGKADVFNLSWANEP
TLDAFSMLSQILSTRKGAMGVSNYGGWSNPEIDKLVAQAAQEQDNTKRLALEEAALKIAK
DETMLVPLHQQPIAWAMLAKVKSVDFRADNKPRHWLTQLDK
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgtcccgtatcagaagttttgtcctagcggccatggctgctgccgccattgccgttccc
gccagcgcggagacccttcgctggggtggtcgcgccgatctctattcgctcgatccctat
tcggttccgtccacatccaacctcgcttttctcaatcatatctacgagggtctcgtccgc
tacggaccggacttccagatcgagccggcactcgccaccgagtggaagctgattgatgga
aagacctggcgctttacccttcgcaagggcgtgaaatttcatgacggtgcagacttcacc
gccgatgatgtcgtcgcatccttcacgcgcgcgtcggacgcgacgtcgccgctgcggggc
aatatcccgatttacgctggcgtcaaaaaagttgacgactacacggtggacctcgatgtc
aacgcgccgacttctctctttctgaacgacataaccaatatcttcatttttaacgccaag
tggttgaaagataacaatagcgagaagcctaccgacttcgcgtcgaaggtcgatggctac
accaccatgcacaccaatggcacaggcccgttcaagctcgaaagccgcgttcccgacagc
aagactgttctcgttgccaatgaaggctggtgggaccagaagaagcacaatctcgaccgc
atcgaattcgtgccgatcgcatctgcggcaacacgcgtcgcggcactgctgtcaggtgaa
atcgacctgatcgactccgccccgatccaggatttgccgcgtctggaatcctcgcccaat
atcacggtcaagaagcgcaccgagcttcgcacgcttttcattggcttcaaccgccgcgaa
aaactggaaaacggccagccgaacccctttaatgatctgcgcgttcgtcaggccttcgaa
gcctccatcgatcgtgacctgatcaacaaaaaagtcatgcgtggtcttgcaagaccgtcc
ggctcgctgatcgcacctgagatcgctggttatgccaaatcgctggacacgttcgagccg
gccgatccggccaaggcgcagaagctgcttgccgatgcgggcatgaagaaccttgccttc
acctatacctgcatgaatgacgagagcgtcaacgaagaggatatctgctcgggcgttgcc
aacatgttgaagcgcggcggtttccagccgaccatcgatattgcgccacgttccgtgcag
tcacccaagcgcaatggcggcaaggctgacgtctttaacctcagctgggcaaacgagccg
actcttgacgccttctcgatgctgtcgcagatcctctcgacccgtaagggcgcgatgggc
gtctccaactatggcggctggtccaatcccgagatcgacaagctcgttgcgcaggcggcg
caggagcaggacaatacgaagcgtctggcgctcgaagaagctgccctgaaaatcgccaag
gacgagaccatgctcgttcccctgcatcagcagccgattgcgtgggctatgctggccaag
gtcaaaagcgtcgacttccgcgctgacaacaagccacgccattggctgacccagctcgac
aaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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