KEGG   Agrobacterium tumefaciens S33: AWN88_03250
Entry
AWN88_03250       CDS       T04213                                 
Name
(GenBank) peptide ABC transporter
  KO
K02035  peptide/nickel transport system substrate-binding protein
Organism
ata  Agrobacterium tumefaciens S33
Pathway
ata02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ata00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AWN88_03250
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ata02000]
    AWN88_03250
Transporters [BR:ata02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    AWN88_03250
SSDB
Motif
Pfam: SBP_bac_5
Other DBs
NCBI-ProteinID: AMD57280
Position
circular:complement(715813..717339)
AA seq 508 aa
MRRKIAFLATAALLLAPGVMMAQEKGGVINVATIGEPPTLDPMASTADLVGIVTQHIFET
LYTFDKGWKVTPLLAESLPEISADGKTYTIKLRQGIKFHDGSDMTSEDVVASLGRWMKIA
SRGKQAAGFIENISAPDAGTVAITLKQPYAPLASLLAFNNSAAIILPAEKQAEPMAEFIG
TGPYMLKERKADQYIQLVRFDGYKSRGGESDGYGGARHQYLDEIRFVPVPDPNTRVEAAV
SGQYDYVDSIPVESFDKVKSSSASQPLMLKPFGYPVFVFNTKEGLSSKLEVRKAVTEALN
MEDVLAAAFGSTDFYALDGAYYPDNFSWHSEEGVEGNYNVGNPEAAAEKLKAAGYNGEPL
RILTSRQYEFHYKMAQVAAEYLKLAGFKVDMQVVDWATLTQRRADPKLWDIYISHSPFLP
EPALMGALSTSSPGWWDTPARKAAVDAFTAEVDPDKRIALWADVQKTIYAELPLLKIGDF
NAVAAKSNKLEGVDPAPWPYFWNASVTK
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgagacgtaaaattgcatttctcgccaccgccgcgttgttgcttgcaccgggtgtgatg
atggcccaggaaaagggcggcgtgatcaatgtcgccaccatcggcgagccgccgacattg
gaccccatggcgtctaccgccgatctcgtcggcatcgttacacagcatattttcgaaacg
ctctatactttcgacaagggctggaaggtgacgccgctgctggcggaaagcctgcccgag
atcagcgcagatggcaaaacctacacgatcaagctcagacagggcatcaagttccacgac
ggcagcgacatgacgtctgaagatgtcgtcgcctcgctcggacgctggatgaagatcgcc
tcgcgcggcaagcaggccgccggctttatcgagaatatctccgcacccgacgccggtacg
gtggcgatcaccctcaagcagccctatgccccgctcgcctcgctgctcgcgttcaacaat
tccgcggcgatcatcctgccggccgaaaagcaggcggagccgatggccgaattcatcggc
accggcccctatatgctgaaggaacgcaaggccgaccagtatatccagctcgtgcgcttc
gatggctacaagtcccgcggcggcgaaagcgacggttacggaggtgcgcgccatcaatat
ctcgatgaaatccgcttcgttccggtgcctgatccgaacacccgcgtcgaagccgccgtt
tcgggccaatacgactatgtcgattccattcctgtggaatccttcgacaaggtgaagtcg
tcgtccgcctcgcagccgttgatgctgaagcccttcggctatccggtcttcgtcttcaac
accaaggaggggctgtcctcaaagcttgaggttcgcaaggcggtgacggaagcgctgaac
atggaagacgtgctcgcggcggctttcggcagcacggatttctacgcactcgacggcgct
tattatcccgacaacttctcctggcattcagaagaaggtgtcgagggcaactataatgtc
ggcaatccggaagccgccgccgaaaagctgaaggcggccggttacaatggtgagccgctg
cgcatccttaccagccgccagtatgagttccattacaagatggcgcaggttgctgcagaa
tatctgaaactggccggtttcaaggtggatatgcaggtggtggactgggcgacgctgacg
cagcgccgcgctgacccgaagctctgggatatttatatcagccacagcccgttcctgccg
gaaccagcgctgatgggcgcgctttccacgagctcgccgggctggtgggatacgccggca
cgcaaggctgcggttgatgccttcactgccgaagtcgatccggataaacgcatcgctctc
tgggccgacgtgcagaagacgatctatgccgagctgccgcttctcaagatcggtgacttc
aatgccgtggcggcgaagtccaacaagctggaaggcgtcgatcctgctccgtggccgtat
ttctggaatgcctcggtcacaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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