KEGG   Agrobacterium tumefaciens S33: AWN88_20165
Entry
AWN88_20165       CDS       T04213                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ata  Agrobacterium tumefaciens S33
Pathway
ata03030  DNA replication
ata03410  Base excision repair
ata03420  Nucleotide excision repair
ata03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ata00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AWN88_20165
   03410 Base excision repair
    AWN88_20165
   03420 Nucleotide excision repair
    AWN88_20165
   03440 Homologous recombination
    AWN88_20165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ata03032]
    AWN88_20165
   03400 DNA repair and recombination proteins [BR:ata03400]
    AWN88_20165
Enzymes [BR:ata01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AWN88_20165
DNA replication proteins [BR:ata03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AWN88_20165
DNA repair and recombination proteins [BR:ata03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     AWN88_20165
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AWN88_20165
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_5 HHH_2 HHH IMS_HHH Transposase_20
Other DBs
NCBI-ProteinID: AMD60483
Position
linear:1860329..1863325
AA seq 998 aa
MKKGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVSGFCNMLWKLLKDARNTDVGVT
PTHFAVIFDYSSKTFRNELYDLYKANRTAPPEDLVPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARQAEAIGADVTIISSDKDLMQLVTANVHMYDAMKDKQIGIPDVIEKWGVGPE
KMIDLQAMTGDSTDNVPGIPGIGPKTAAQLLEEYGDLDTLLARAGEIKQQKRRENIIANA
ELARISRQLVALRTDVPLDQPLEALVLEPQNGPKLIAFLKAMEFTTLTRRVAEATETDAS
AIEAANVPVQWGADAHGPDLDAPAAPAAGEAAAGVTGTAVSPAIPARKGVGEGSAPADLA
TARQTLFAAAKIDTSAYTTIRDLATLDLWVAAARETGVVAFDTETTSLDPMQAELVGFSL
AIADNGKDASGSDIRAAYIPLTHKTGSGGDLFSDGIRLAEGQVPFYEALVRLKDLLEDEA
VLKVAQNLKYDYLLMKRHGVVMQSFDDTMLISYVLEAGKATHGMDSLSERWLGHTPIPYK
DVAGSGKSSVTFDFVDIDKATAYAAEDADVTLRLWMALKPRLVSERLTKVYERLERPLVP
VLAHMEERGIAVDRQILSRLSGELAQKAAAFEEEIYELAGERFNIGSPKQLGDILFGKMG
LPGGSKTKTGQWSTSAQVLEDLAAEGIELPRKIVDWRQLTKLKSTYTDALPGYIHPETKR
VHTSYALASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLLSADYSQIELRVL
AHVADIPQLRNAFENGIDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGLA
NQLGIARSEAGEYIKKYFERFPGIRDYMEATKAFARENGYVETIFGRRAHYPEIRSSNPS
VKAFNERAAINAPIQGSAADIIRRAMVRIEPALEAENLSARMLLQVHDELIFEVDEAEIE
KTLPVVVSVMENAAMPAISMKVPLQVDARAADNWDEAH
NT seq 2997 nt   +upstreamnt  +downstreamnt
atgaaaaaaggcgatcatctcttcctcgttgacgggtccggtttcattttccgggccttc
catgccatcccgccgctgaaccgcaagtcggacgggctgccggtcaacgccgtttccggc
ttctgcaacatgttgtggaagctcctgaaggatgcgcgcaacaccgatgtcggcgtgacg
cccacgcattttgcggtaatttttgattattcatcaaagacattccgcaatgagctttat
gatctctataaagccaatcgcacggcgccgccggaagatctggtgccgcaattcgggctg
atacgggaggcgacgcgcgccttcaaccttccctgcatcgagacggaaggcttcgaggcg
gacgatatcatcgccacctatgcccggcaggcggaggccattggggccgatgtcaccatc
atctcctccgacaaggatctgatgcagctcgtcactgccaatgtccacatgtacgatgcg
atgaaggacaagcagatcggcatccctgatgtcatagagaaatggggcgtgggtcccgaa
aagatgatcgacctgcaggccatgaccggcgattcgaccgacaatgttccgggcatcccc
ggcatcggtccaaagacggccgcgcaattgctggaagaatacggcgatctcgatacgctg
ctcgcccgggcaggtgagatcaagcagcagaagcgtcgggaaaatatcatcgccaatgcg
gaacttgctcgtatttccagacagctcgtggccctgaggaccgacgtgccgctggatcag
ccgcttgaggcactggtgctggaacctcagaacggcccgaaactcattgccttcctgaag
gcgatggaattcaccacgctgacgcggcgggttgccgaagcgacagagaccgatgcttcc
gccattgaggccgccaatgtgccggttcagtggggcgctgacgcccatggtcccgatctc
gatgcgccggccgctccggctgcgggtgaagcggctgctggcgtaacgggcactgcggtt
tcgcccgctattccggcgcggaaaggtgtcggggagggcagcgcgccggctgatcttgcc
accgcccgccagacgctttttgccgccgccaagatcgacacgagcgcctacacgacgatc
agggatcttgcgacgctggacctctgggttgcggcggcgcgggaaacgggggtcgtcgcc
ttcgatacggaaacgacctcgcttgatccgatgcaggcggagctcgtcgggttttcgctg
gcaatcgccgataatggcaaggatgcctcgggcagcgatatacgcgccgcctacattccc
ttgacgcacaagactggctccggcggcgatctattcagcgatggtatcaggctcgccgaa
ggccaggtgcccttttacgaagcactggtccgtctcaaggacttgcttgaagacgaggcc
gtgctgaaggtcgcgcaaaatctcaaatatgactatctgctcatgaaacgccatggcgtc
gtcatgcagagtttcgacgatacgatgctgatctcctatgtgcttgaggctggcaaagcg
acgcacggcatggattcgctgtccgaacgttggctcggccatacgccgatcccctataag
gacgtggcgggatcgggcaagtcgagcgttaccttcgattttgtcgacatcgacaaggcg
acggcatatgcagcggaggacgctgacgtcaccttgcggctgtggatggcgctgaagccg
cggcttgtttcagaacggctgaccaaggtttacgagcggctggaacgtccgcttgtgcct
gttctggcgcatatggaggagcgtggcatcgctgtcgaccggcaaatcctctcacgtctt
tccggcgaacttgcccagaaggcggcagcgtttgaagaggaaatctacgagctggccggc
gagcgtttcaacatcggctcgccaaagcagctcggcgacatcctgttcggcaagatgggc
ctgccgggcggttccaagaccaagaccggccaatggtcgacctcggcacaggtgctggag
gatttggcggctgaaggtattgaactgccccgcaagatcgtcgactggcggcagctgacg
aagctgaaatccacctatacggatgctctaccgggatatatccacccggagacgaaacgg
gtgcatacatcctatgcgctggcctccaccacaacaggccgtctgtcgtcctcggaaccg
aaccttcagaacatccccgtccgcacggcggaagggcgaaaaatccgcacggctttcatc
tccacgcccggccacaagcttctttccgccgactacagccagatcgaactgcgcgtgctg
gcccatgtcgccgatattccgcagcttcgaaacgccttcgaaaacggcatcgacattcat
gccatgacggcttcggaaatgtttggcgtgcctgtcgaaggcatgccctcggaagtgcgc
cgccgcgccaaggccatcaatttcggcattatctacggtatttcggctttcggtctcgcc
aaccagctcggtatcgcccgttctgaagccggcgaatatatcaagaaatatttcgagcgt
tttccgggcatccgcgactacatggaggcgacaaaggctttcgcccgtgagaacggttat
gtcgagacgattttcggccgccgcgcccattatccggaaatccgctcgtccaacccttcc
gtgaaggccttcaacgagcgcgccgccattaacgcgccgatccagggctccgcggcggat
atcatacggcgcgccatggtccgtatcgaaccggcgctggaggctgaaaacctttccgcc
cgcatgctgttgcaggtgcatgacgaactcatcttcgaggtcgatgaagcggaaatcgag
aaaactctgcccgtcgtcgtctcggtcatggaaaatgcggccatgccggcaatctccatg
aaggtgccattgcaggtggatgcccgcgcggctgacaactgggacgaggcgcattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (22)   

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