KEGG   Agrobacterium tumefaciens S33: AWN88_23320
Entry
AWN88_23320       CDS       T04213                                 
Name
(GenBank) RNA methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
ata  Agrobacterium tumefaciens S33
Brite
KEGG Orthology (KO) [BR:ata00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ata03009]
    AWN88_23320
Enzymes [BR:ata01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     AWN88_23320
Ribosome biogenesis [BR:ata03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    AWN88_23320
SSDB
Motif
Pfam: tRNA_U5-meth_tr MTS TRAM Methyltransf_31 Cons_hypoth95 Methyltransf_15 Methyltransf_25 UPF0020 Met_10
Other DBs
NCBI-ProteinID: AMD61035
Position
linear:complement(2509572..2510822)
AA seq 416 aa
MSTQTVTIKSLGAQGDGIAHCPDGPVYVPFALPGETVAIAKVKDHGTVMSITEASPERRT
PACRHFGPEGKNGTCGGCSLQHLADEPYHAYKRELVVSALKSKGLTPDVDNLVICHPGER
RRAVFAARKTEKGLLLGFSQANSHHIVAIEECPVTSPGIVSRLDAIRAIGLSMVANADPF
RMTVLETLSGLDISVDGIKSVSDKQRRTLTETVLAMRGIARVSLSGEILIEPQKPIIEFG
GVAVSPPAGSFTQATKQAEDAMAELVLAHVGKSKRIADLFCGSGTFALRLARVGKVHAVE
AEDKPLKALDFAARNTQGLKPVSVEKRDLFRRPLMTSELKNYDAVVFDPPRAGAEFQCKE
LARSTVKKIVAVSCNPLTLARDLAILTEGGYRITRVTPVDQFLWSPHVEAVATLEK
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgagcacacaaaccgtcaccatcaagagcctcggcgcccagggcgatggcattgcgcac
tgtcccgacggcccggtctatgtgcccttcgcgttgcccggcgagacggtcgccatcgcc
aaggtgaaggatcacggcaccgtcatgtcgattacggaagcctcacccgagcgccgtaca
cccgcctgccgccatttcggcccggagggcaagaatggcacctgcggcggctgttcgctg
caacatctcgccgacgagccttaccatgcatacaagcgggaactggtggtctcggcactg
aaatcgaagggcttgacgcccgatgtggataatctcgtcatctgtcaccctggcgagcgc
cgccgtgcggtgttcgcggcccgcaagacggaaaagggcctgctgctcggcttcagccag
gcgaacagccaccacatcgtcgccattgaggaatgtcccgtcacctcgcccggcatcgtc
tcgcgactggatgccatccgcgccatcggactttcaatggtggcgaatgcggaccccttc
cggatgacggtgctggagaccctttccggcctcgatatttccgtcgacggcatcaagtcg
gtcagcgacaagcagcgccgcacgctcacggaaacggttcttgccatgcgcggcattgcg
cgtgtttcactgtcgggtgaaatattgatcgagccccagaagccgatcatcgagtttggc
ggggtggcggtatcgcccccggccggcagcttcacgcaggcgacgaagcaggcggaggac
gccatggcggagctggtgcttgcccatgtcggcaagtccaaacgcattgccgatctcttc
tgcggctccggtacatttgcgctgcggcttgcgcgcgttggcaaggtgcatgcggtggag
gcggaagacaagccgctgaaggcgctggatttcgccgcccgcaacacgcagggcctgaag
ccggtcagcgtcgagaagcgcgatctcttccgccgccccctgatgacaagcgagctcaag
aattacgacgccgtcgtcttcgatccgccacgcgcgggcgcggaattccagtgcaaggaa
ctggcacgcagcacggtaaagaagatcgtggccgtgagctgcaacccgctgacactggcg
cgcgatctcgccatcctgaccgagggcggctatcgcatcacccgcgtcacgccggtcgac
caattcctgtggtcgccgcatgtggaagccgtggcgacactggagaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system