KEGG   Aethina tumida (small hive beetle): 109604324
Entry
109604324         CDS       T06105                                 
Name
(RefSeq) ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
atd  Aethina tumida (small hive beetle)
Pathway
atd03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:atd00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    109604324
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atd03019]
    109604324
   03009 Ribosome biogenesis [BR:atd03009]
    109604324
   03036 Chromosome and associated proteins [BR:atd03036]
    109604324
Enzymes [BR:atd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     109604324
Messenger RNA biogenesis [BR:atd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     109604324
Ribosome biogenesis [BR:atd03009]
 Eukaryotic type
  90S particles
   RNase
    109604324
 Prokaryotic type
  rRNA processing factors
   109604324
Chromosome and associated proteins [BR:atd03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     109604324
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm
Other DBs
NCBI-GeneID: 109604324
NCBI-ProteinID: XP_019876435
EnsemblRapid: ENSATDG00005000710
Position
1:join(16057227..16057612,16058016..16058560,16058612..16058732,16058785..16059161,16059462..16059721,16059864..16060021,16060081..16060535,16060594..16060946,16061006..16061359,16061416..16061738,16061792..16061937,16061993..16062546)
AA seq 1343 aa
MADSYYYYNNNMNYNHYNANPQYQQFNVPPPPQPQWNEWMHQNVPNSQFNSYGAFNSYIP
PPDFSVPPPNITVPPRAPPQMGIQYNSNSNPVQHQNYDNQFSKDLHSYRMPQNGYCSTST
QQNSKETFRPIISDQNGRYERPYRERSRSPTRDDRRPNYKKQYSTPVISNGKKVPFARTR
FDKYIPSNNANKPSARRDAKEKSERDILLCNYRKDYCATREEITTKLEELAKQDDLLEKE
KDIWTRTTPADLHYKRDDDNPKIIKGTPKLLQLCEQFKTKLINRRANANKNKPEYIPPPR
KNRAKLCTHKSEVHSSSDSSSEEDLTDEEDYTMEELERKQKHPDRLHPEMWYNDPGEMND
GPLCRCSMKSRKSGIRHGIYPGEKTQVKCDLNSNNADKLYHYRITISPPTNFLIKTPTII
QHDEHEFIFEGFSMFSHFPLVKLPTCKVIRFNIEYTIFYIEEKLPENFTIQELDLFHEYL
FTEILELVDLDFKGHGDKDGCSQFHFMPRFVRELPDNGKEILSMNEVLKYLIEKSVPLIR
KDQLEDMVNMSQYEWQSFADEVKGMVVTYPGKKPCSVRVDQLDRNLDQQKPGNYQFPEIV
HFGIRPPQLSYAGNPDYQKAWRDYVKFRHLLANMSKPSFDDKRKLEAKENKLQEMRTQGK
MKRDVTVDISSEGFYRTGIMCDIIQHAMLIPVLVCHLRFHHALDVLEATINYKFNNRSLL
QLALTHPSYRENFGTNPDHARNSLTNCGIRQPEYGDRRIHYMNTRKRGINTLINIMSRFG
KQKETESNIGHNERLEFLGDAVVEFLSSIHLFFTFPDLEEGGLATYRAAIVQNQHLAVLA
RKLDLDQFMLYAHGSDLCHDLELRHAMANCFEAFMGALYLDGGIEVVDRVFSGTLFKEDK
QILDTWVQLPLHPLQEQEPQGDRQWIPKFQFLQKLTEFEKSLGVEFTHIRLLARAFTDRS
IGYTNLTMGSNQRLEFLGDTVLQLIASDYLYKYFPEHHEGHLSLLRSSLVNNRTQAVVCD
EIAMTNYAVYHNPKVELKTKDRADLLEAFIGALYVDKGIEHCEAFCKVTLFPRLQEFIVK
QDWNDPKSKLQQCCLTLRTMDGGEPDIPVYKVIECKGPTNTRLYTVAVYFRGKRLAHETG
HSIQQAEMKAAKKALEISHDLFPQLDHQKRVIAHSMKKQKKRKTKRLPGNIDDQDSSSSH
LNNRRRSKSRSRFRSRSRSRSRSRSRLRSRSRSSLKSRSRSKSRSRSRSRCRSNSKSRNS
SPYSIDSTSSRDSRSHYRRSISSDSCKSLSPDRFDRNSPCSSKKTASSSRSRNISPLSKQ
AYSPKPSTSTADTDFPGFDEDVF
NT seq 4032 nt   +upstreamnt  +downstreamnt
atggctgactcttattactattataacaataacatgaattacaatcattacaatgcaaac
ccgcaatatcaacaattcaatgttccgccaccgccgcaaccccagtggaatgaatggatg
catcagaatgtacctaactcacaatttaactcttatggggcattcaattcgtatatacca
ccacctgacttcagtgtgcccccacctaatataacagtgccaccacgagcacccccacaa
atgggcatacaatataactctaatagtaacccggttcaacatcagaattatgataaccag
ttttcgaaagacctacattcatacaggatgccgcagaatggatattgttccacatcgact
caacaaaattcaaaggagacctttagaccaataataagtgatcaaaatggaagatatgaa
aggccatacagagaaagaagtcgatcaccaaccagggatgataggagacctaattataaa
aagcagtacagcacaccagttattagcaatggtaaaaaagtaccttttgctagaactaga
tttgataaatatattcccagtaataatgcaaacaaacctagtgcaagaagagatgccaaa
gagaaatctgaaagggacattctgttgtgcaattatcgcaaggattattgtgcgaccaga
gaagaaataaccactaaattagaagaattagctaaacaggacgaccttctggagaaggaa
aaggatatttggacgaggaccactccggcagatttacattacaaacgtgatgacgataat
ccgaaaattataaagggaacacccaaattattgcaactttgtgaacaatttaaaacgaaa
ttaattaatagaagggctaacgctaacaagaacaaacccgagtacattccaccacccagg
aaaaatagagccaaattatgtacacataaaagtgaggtgcatagctcctcagatagttct
agcgaggaagacctgacggacgaggaggactacaccatggaggagctggagaggaaacag
aagcaccccgaccgacttcatccggaaatgtggtacaacgatcccggtgaaatgaacgac
ggaccactttgcagatgttcgatgaagtcgaggaagtctggcatcagacatggaatctat
cccggcgagaagactcaagtgaaatgcgatctcaattcaaataacgcggataaattgtat
cattatcgaattacaatttccccaccaacaaattttcttattaaaacgcccactattatt
caacatgacgaacacgagtttatttttgagggattttcgatgttttctcattttccttta
gttaaattacctacctgtaaggttatccgatttaatattgagtacaccatattttacatt
gaagagaagctgccagaaaacttcaccatccaggaattagacctttttcatgagtatctt
ttcactgaaatcttagaacttgttgatctagattttaaaggtcatggtgataaagatgga
tgttcgcagttccacttcatgccgcgcttcgtacgtgaattgccagataatggtaaagaa
atattgtccatgaatgaggtactcaagtatttgattgaaaaatctgtgccactaataaga
aaggatcagttggaggacatggttaatatgagtcaatatgagtggcaaagctttgcagat
gaagttaagggaatggttgtgacttatcctggcaaaaagccatgctcagttagagtagat
cagctagacaggaatttagaccaacagaaaccaggaaattatcaatttcctgaaatcgtg
catttcggaattagaccacctcaattaagttatgcaggaaatcctgattatcaaaaagcc
tggcgagattacgtgaaatttagacacctgctggcaaatatgtccaaaccgtccttcgat
gacaaaaggaagcttgaagctaaagagaataaactacaagaaatgaggactcagggtaaa
atgaaacgagatgtcacagtcgacatatcttcggagggattttatcgcactggaattatg
tgtgatattatacaacatgccatgttgataccagttttagtttgtcatttgagatttcat
catgccttggacgttctggaagcaactattaactataaattcaacaatagaagtcttctt
cagctggcattgacgcatccatcgtacagggagaatttcggcacaaatccagatcatgca
cgtaacagtctgaccaattgcggcatccgacaacctgagtacggagatcgaaggatccat
tacatgaacacaaggaaaagaggcattaacacgctcatcaatattatgtccaggttcggg
aaacagaaagaaactgaatcgaacattggccacaatgaacggttggagttcttgggcgac
gcggtggtagaatttttgtcgtcgattcaccttttctttacgtttcctgatcttgaagaa
ggaggtttggcaacttacagagctgcaatcgtacagaatcagcatttggccgtgctggca
cggaaactcgatttggaccaatttatgttgtacgctcacgggtccgatttgtgtcacgat
ttggagctgcgacacgctatggctaactgctttgaagcgtttatgggagctttgtattta
gatggagggatagaggtggtagacagggtattttcgggaacactctttaaggaagataaa
caaatactggacacttgggttcaactacccttacatcctttgcaagagcaagaaccacag
ggagacagacagtggatacctaaatttcaatttttacaaaagttaactgaatttgagaag
tcacttggtgtagaattcacacatattcgactattggccagagctttcacagatagaagt
attgggtacacaaatttgaccatgggttcgaatcaaagattggagttcttgggtgataca
gtcttgcagctaatcgcatccgactatttgtacaagtactttcctgaacatcatgaagga
catttatctctgttgagaagttccctagtgaataataggacacaagctgtcgtttgtgat
gaaattgcaatgaccaactatgcagtttatcacaaccccaaagtcgagttgaaaaccaag
gatagggcagatttattggaagctttcattggtgccttatatgtggacaagggaattgaa
cattgcgaggctttctgtaaagttacactgttcccaagacttcaagaatttatagtgaaa
caagattggaatgatcctaaatcaaagcttcaacagtgttgtctcactcttagaaccatg
gatggtggggaaccagatattcctgtttacaaggttattgaatgcaagggtccaacgaat
actcgattgtacactgtggcggtctattttagaggcaaacgtcttgcacacgaaactggt
catagcatacaacaggcagaaatgaaggccgccaagaaagcattggaaatctcccatgat
ttattcccacaactagatcaccaaaagagggttatagcacacagcatgaaaaagcaaaag
aaacgcaaaactaaaagactccctggtaacatagatgaccaagacagttcgagttctcat
ttaaataacagaaggcgtagcaaaagtaggtccagattcaggtccaggtctagatcaagg
tcaagatccagatctcgtttgagatccaggtccagatccagcttaaaatcgagatccaga
tcgaaaagccgatccagatcgaggtcgaggtgcaggtcgaattcgaaaagtcgtaactcg
tcgccctacagtatcgattccacttctagtcgtgactcacgatctcattatcggagatca
atatcttccgatagttgtaaaagtttatcgccggatagatttgacagaaattcaccatgc
tcttcaaagaagactgcgagtagttcgagatcacgaaatattagtccgttgagcaagcag
gcttactctcctaaaccgtctacatcaaccgcagacaccgatttccctgggtttgacgaa
gatgtattttag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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