KEGG T00857: Athe

Caldicellulosiruptor bescii: Athe_0006

Entry

Athe_0006         CDS       T00857

Name

(GenBank) DNA gyrase, B subunit

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

ate Caldicellulosiruptor bescii

Brite

KEGG Orthology (KO) [BR:ate00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ate03032]
    Athe_0006
   03400 DNA repair and recombination proteins [BR:ate03400]
    Athe_0006
Enzymes [BR:ate01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Athe_0006
DNA replication proteins [BR:ate03032]
Prokaryotic type
  DNA Topoisomerases
   Athe_0006
DNA repair and recombination proteins [BR:ate03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Athe_0006

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 GyrB_hook

Other DBs

NCBI-ProteinID:

ACM59172

UniProt:

B9ML41

Position

4135..6087

AA seq 650 aa
MILKIISLEGENKLDMINTNSQQYSASEIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVYE
IVDNAIDEAMAGFCKNIEVVIHKDNSVTVIDDGRGIPVDIHPKLQKSGVEVVFTVLHAGG
KFNERVYKVSGGLHGVGASVVNALSRYLEVEVYRDGKVYYQRYERGKPTCELKVIGTTDR
TGTKVTFLPDDEIFETIEFDGDVILQRLRELAFLNKGIRIVFVDEREKNVKPVELKYDGG
IAEFVKFLNRNKEVLHQEPIYIEGEKNDILIEVAVQYTEDFGENIYSFANNIATIDGGTH
LIGFKTAVTKAVNEYAKKYNFIKGDTQLLGEDIRDGMTAIVSVKIHEPQFEGQTKTKLGN
SEARWAVENLVSERLAAFLEENPDVSKKIIDKAILAAKAREEAKKARELVIKRKSALDSS
NLPGKLADCSEKDPAKCEIFIVEGDSAGGSAKQGRDRRYQAILPLWGKMLNVEKASQDKI
YSNDKLLPLIQALGVGIGNDIDLKKLRYHKVIIMADADVDGSHIRTLLLTFFYRYMRPLI
ENGHIYIAQPPLYKITKGKQVRYAYNDKELQKILQEMKDAQVQRFKGLGEMNAQELWETT
MDPARRILLRVELEDAVMAEEIFTILMGDKVEPRREFIEKNAKYVRNLDI

NT seq 1953 nt +upstreamnt +downstreamnt
atgattttaaaaattattagtttggaaggtgagaacaaattggatatgataaatacaaat
tctcagcaatattcagcaagcgagatacaggttttagagggacttgaggctgtaagaaaa
cgtcctggaatgtatataggttcaacttcccagagaggtcttcaccatttggtgtatgag
attgttgacaatgcaattgacgaggcaatggcagggttttgtaaaaacattgaagttgtg
attcacaaggacaactctgttactgtaattgacgatggaagaggaattccggttgatatt
cacccaaagcttcaaaaaagcggtgttgaggttgtatttactgttcttcacgcaggtgga
aagttcaatgaaagagtttacaaggtatccggaggtcttcacggtgttggcgcatctgtt
gtgaatgctctatctcggtacttggaagttgaagtttacagagacggcaaggtatactat
caaaggtatgaaagaggaaaaccaacctgtgagttaaaagtaattggtactaccgacagg
acaggtacaaaagttacatttttgcctgacgatgagatttttgagaccatagagtttgac
ggcgatgtgatactgcagcgtcttcgtgaacttgcgtttttgaacaaggggataaggata
gtctttgttgatgagagagaaaaaaatgtaaaacccgttgagctaaaatacgatggtggt
attgcagagtttgtaaagtttttgaacagaaacaaggaagttttgcaccaagagcctata
tacattgaaggcgagaaaaacgacatcctcattgaggttgcagtgcagtacacagaagat
tttggtgagaacatctattcatttgcgaacaacatagcaaccatagacggtggcactcac
cttataggctttaaaactgctgttacaaaagctgtaaatgaatatgcaaaaaagtataac
ttcataaaaggtgatacacaacttcttggtgaggacataagagacggtatgacagcaatt
gtgtctgttaagattcacgagccgcagtttgaaggacagacaaagacaaagcttgggaat
agcgaagcacgctgggctgttgaaaatcttgtttctgaaagattggcagcttttttagaa
gaaaaccctgatgtgtcaaaaaagattatcgacaaggccattttggcggcaaaagctcgc
gaagaggcaaaaaaggcaagagagcttgtaataaagagaaagtctgccttagatagttca
aacttgcctggtaagcttgcagactgttcagaaaaagaccctgcaaagtgcgaaatattc
atagttgagggtgattctgcaggcggttctgcaaaacaagggcgtgacaggcgctatcag
gcaatcttgcctctttggggtaagatgctcaacgtcgaaaaggcaagccaggacaagatt
tattcaaacgacaagcttcttcctttaattcaggcacttggcgttggaattggaaatgac
atagatttaaagaaactaagataccacaaagtcataataatggcagatgctgacgttgac
gggtctcacataagaactcttcttcttacattcttttacagatacatgagacctttaata
gaaaacggccacatttacattgcacagccaccgctttacaagataacaaaaggcaagcag
gtaagatatgcttataacgataaagaacttcaaaagatattacaggagatgaaagatgct
caggttcagcgttttaaaggacttggtgaaatgaatgcacaagagctttgggagaccacc
atggaccctgcacgaagaattcttcttagagttgagcttgaagatgctgtgatggcagag
gagatcttcacaattctgatgggcgacaaggtagagccaagaagggagtttattgaaaag
aatgctaagtatgtaaggaatttggatatatag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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