KEGG   Agrobacterium tumefaciens Ach5: Ach5_16430
Entry
Ach5_16430        CDS       T03816                                 
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
atf  Agrobacterium tumefaciens Ach5
Pathway
atf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:atf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Ach5_16430 (xthA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:atf03400]
    Ach5_16430 (xthA)
Enzymes [BR:atf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     Ach5_16430 (xthA)
DNA repair and recombination proteins [BR:atf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     Ach5_16430 (xthA)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: AKC07419
UniProt: A0AA86FXE8
Position
circular:1688293..1689090
AA seq 265 aa
MKIATWNINGVKARIENLCQWLKDSSPDIVCLQEIKSIDEGFPRLELEALGYHVETHGQK
GFNGVALLSKMKPDEINRGLPGDDADEQARFIEGVFSVDGGAIRVCSLYLPNGNPPDDPV
KYPYKLAWMERLRRFAEDRLALEEPLILAGDYNVIPEPFDCHDPRVWAGDALFLPKTRSA
FRRLENLGFTDAARATTDEPGLYSFWDYQAGAWPKNNGIRIDHLMLSAEAADRLESVSIE
KHVRAWEKPSDHVPVCGYFNFTPIN
NT seq 798 nt   +upstreamnt  +downstreamnt
atgaagattgccacctggaacatcaacggcgtcaaggcgcgtatcgaaaacctctgccag
tggttgaaggattcatcgcccgacatcgtttgccttcaggaaatcaagtcgattgacgaa
ggctttccccgccttgagctggaagcgctcggctatcacgtcgagacccatggccagaag
ggtttcaacggcgtcgcccttctgtcgaagatgaagcccgacgagataaatcgcggcctg
ccgggcgacgatgccgatgaacaggcgcgcttcatcgagggcgtgttctccgttgatggc
ggtgcgatccgggtctgctcgctctatctgccgaacggcaatccgcctgacgatccggtc
aaatatccctacaagctcgcatggatggagcggttgcgccgctttgccgaagatcgcctt
gctcttgaggagccgcttattctggcgggtgactacaacgtcatccccgaacccttcgat
tgccacgatccgcgggtctgggctggcgatgcgctgttcctgcccaagacacgctcggca
ttccgcaggctggaaaatctcggctttaccgatgccgcacgcgcgacgacggatgaaccc
ggactttattccttctgggattatcaggctggcgcatggcctaagaataacggcatccga
atcgatcacctgatgctgtcggcggaagcggccgacaggctggaatcggtgagcatcgaa
aaacatgtgcgggcctgggaaaaaccgtcagaccacgtaccggtctgcggttatttcaat
tttacgccgatcaattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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