KEGG   Agrobacterium tumefaciens Ach5: Ach5_18310
Entry
Ach5_18310        CDS       T03816                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
atf  Agrobacterium tumefaciens Ach5
Pathway
atf03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:atf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Ach5_18310 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atf03021]
    Ach5_18310 (rpoA)
   03400 DNA repair and recombination proteins [BR:atf03400]
    Ach5_18310 (rpoA)
Enzymes [BR:atf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Ach5_18310 (rpoA)
Transcription machinery [BR:atf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Ach5_18310 (rpoA)
DNA repair and recombination proteins [BR:atf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Ach5_18310 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L DUF211
Other DBs
NCBI-ProteinID: AKC07607
UniProt: A0AA86FW76
Position
circular:complement(1875413..1876423)
AA seq 336 aa
MIQKNWQELIKPNKVEFTSSSRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDSKRMVVRKQGPGSVTAGDIQTVG
DIEILNPDHVICTLDEGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLIMTIETNGSVSGEDAVAFAARILQDQLGVFVNFDEPQKEAEE
ESVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgattcagaagaactggcaggaacttatcaagccgaacaaggtcgagttcacctcgtcc
agccgcaccaaggcaacgctcgttgccgagccgctggagcgtggtttcggtcttactctc
ggcaacgcgcttcgtcgcgttctgttgtcttctctgcgtggtgccgctgttacggccgtg
cagatcgacggtgtcctgcacgaattctcctccatccccggcgttcgggaagatgtgacg
gatatcgtgctcaacatcaaggaaatcgccatcaagatggatggtgacgattccaagcgc
atggtcgtgcgcaagcagggtccgggttcggtaaccgctggtgacatccagacggttggc
gacatcgagatcctgaaccccgaccacgtgatctgcacgctggacgaaggcgctgaaatc
cgcatggaattcaccgtcaacaacggcaagggttacgtaccggctgagcgcaaccgcgcg
gaagatgccccgattggcctcattccggtggacagcctgtattctccggtcaagaaagtg
tcctacaaggtggaaaacacccgtgaaggtcaggttctcgactatgacaagctgatcatg
acgatcgagaccaacggttcggtttccggcgaagacgccgttgccttcgccgctcgcatt
cttcaggaccagctcggcgtcttcgtcaacttcgacgagccgcagaaggaagcagaagaa
gaatcggttaccgaactcgcgttcaacccggcgcttctcaagaaggtcgacgagctggaa
ctgtccgttcgttcggcaaactgcctgaagaacgacaacatcgtctatatcggcgacctg
atccagaagaccgaagccgaaatgcttcgcacgccgaactttggtcgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggtctgcacctcggtatggaagtaccggcatgg
ccgcctgagaacatcgaagatctcgccaagcgttacgaagaccaatactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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