KEGG   Agrobacterium tumefaciens Ach5: Ach5_30480
Entry
Ach5_30480        CDS       T03816                                 
Symbol
speF
Name
(GenBank) ornithine decarboxylase
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
atf  Agrobacterium tumefaciens Ach5
Pathway
atf00330  Arginine and proline metabolism
atf00480  Glutathione metabolism
atf01100  Metabolic pathways
atf01110  Biosynthesis of secondary metabolites
atf04148  Efferocytosis
Module
atf_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:atf00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    Ach5_30480 (speF)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    Ach5_30480 (speF)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    Ach5_30480 (speF)
Enzymes [BR:atf01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     Ach5_30480 (speF)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AKC08821
UniProt: A0AA86KT15
Position
linear:complement(358384..359517)
AA seq 377 aa
MTTARILDFIKTRRPEGPCLVVDLDVVRDNFNAFRHSLPNSAIYYAVKANPAPEILKLLA
SLGSNFDCASVAEIQMALDAGATSDRISFGNTIKKERDVARAYALGIDLFAVDSHEEVEK
VARAAPGARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLESYGVSFHVGSQ
MMNLDAWDAALGDAKRVFASLSKQGIHLQMVNMGGGFPTKYLRDVPAAEEYGQAIDTALR
KHFGNQIPKTIIEPGRGMVGNAGVIKAEVVLVSRKSDNDNHRWVFLDIGKFGGLAETMDE
AIRYPIRTERDQDEMEPCVLAGPTCDSADVLYEKNMYPLPVSLTIGDEVLIEGAGAYTTT
YSAVAFNGFEPLKAYVI
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgacgactgcacgcattctcgatttcatcaagacccgacgtcccgaaggcccttgcctc
gtcgtcgacctcgacgtcgtgcgcgacaatttcaacgcgttccggcattccctgccgaac
agcgcgatctactatgcggtcaaggcaaacccggctcccgaaatcctgaagctgcttgct
tcgctcggctcgaacttcgattgcgcctccgtggctgaaatccagatggcgcttgatgca
ggtgcaacgtccgaccggatctcgttcggcaacaccatcaagaaggaacgcgatgtcgcc
cgcgcttacgcgctcggcatcgatctcttcgccgtcgacagccatgaggaagtcgagaag
gttgcccgtgccgctcctggcgcgcgcgtgttctgccgcgtgctgacggacggtgaaggt
gccgaatggccgctgtcgcgcaagttcggctgcgtaccgcagatggctgttgatgttctg
gtctacgcacatcagctgggcctcgaatcctacggcgtttccttccatgtcggttcgcag
atgatgaatctcgacgcatgggatgcagcgctgggcgatgccaagcgcgttttcgcttcg
ttgtccaagcagggtattcacctgcagatggtcaatatgggcggtggtttcccgaccaag
tacctgcgcgacgttcctgctgccgaagaatacggccaggctatcgacacggcgctgcgc
aagcacttcggcaaccagatcccgaagacgatcatcgagccgggccgtggcatggtgggt
aacgctggcgtcatcaaggcggaagttgttctcgtgtcgcgcaagtccgacaacgacaac
catcgctgggtgttcctcgacatcggcaagttcggcggtctcgccgagacgatggatgag
gctatccgctacccgatccgcaccgagcgcgatcaggacgagatggagccttgcgttctg
gccggtccgacctgcgacagcgccgacgtgctgtacgaaaagaacatgtacccgttgccg
gtctctctgaccatcggcgacgaggttctgatcgaaggcgcaggtgcctatacgacgacc
tattcggcggttgccttcaacggtttcgagccgctgaaagcctacgtcatctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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