KEGG   Arabidopsis thaliana (thale cress): AT1G03770
Entry
AT1G03770         CDS       T00041                                 
Symbol
RING1B
Name
(RefSeq) RING 1B
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    AT1G03770 (RING1B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT1G03770 (RING1B)
   03036 Chromosome and associated proteins [BR:ath03036]
    AT1G03770 (RING1B)
Enzymes [BR:ath01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     AT1G03770 (RING1B)
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    AT1G03770 (RING1B)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     AT1G03770 (RING1B)
    Noncanonical PRC1 (PRC1.1)
     AT1G03770 (RING1B)
    Noncanonical PRC1 (PRC1.3/1.5)
     AT1G03770 (RING1B)
    Noncanonical PRC1 (PRC1.6)
     AT1G03770 (RING1B)
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_5 zf-RING_UBOX zf-rbx1 zf-C3HC4_5 zf-RING_4 zf-C3HC4_4 zf-RING_10 zf-RING_11 zf-RING_6
Other DBs
NCBI-GeneID: 839413
NCBI-ProteinID: NP_171873
TAIR: AT1G03770
UniProt: Q0WX00 A0A178WM72
Position
1:944572..947682
AA seq 460 aa
MPSLKSFSAAEEEDDQLGRNSEAERFNPEAVEKEEDPDKMDEKDESGDEEDDVKRDQVEA
EDEEALGEEEDSKERSQSSSAGELSESEYMVVDLADICKDVQCSICLGIIRKTRTVMECL
HRFCRECIDKSMRLGNNECPTCRKHCASRRSLRDDPNFDALIAALFKNIDKFEEEELNFR
QDDEARNKQIQASIAQVSQRQSKALVKRKSVGKGTAILSRSRRSGGGSRRRRNCRNIEQD
TSEANDDDDQNKRGKDSSSDEPCERQRKKRSATQPSSSNANNNDNCAGNGTEQTHQRDSR
VISPVLVWNSELIAWGRGGTRSNTRQGNNNQGAISKRNARLKRLVEYLGSLEGNSVELDI
HLKLVSLDTEGLLNLHEPYLCFRPTLLVKQLREYVARHLKLKAEEVELLVSKDGDTVIGN
KTSTEKMQSLQDDETVAKLKVDCISSNGYMIVVYRRKQIA
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgccttccttgaagagcttctccgccgccgaggaagaagatgaccaactgggtcggaac
tcagaagctgaaagattcaatcctgaagctgtggagaaagaagaagatccagacaaaatg
gatgagaaggacgaaagtggagatgaggaagacgacgtgaaacgtgaccaagtagaagca
gaggatgaggaagcgttaggagaagaagaagattctaaggaaagaagtcaatcttcttca
gcaggagagttatcagaatcagaatatatggttgttgatctagcggatatctgtaaggac
gtgcaatgctcgatatgtttagggattataaggaaaacaaggactgtgatggaatgtctc
caccggttttgccgagagtgcattgataagtcaatgagattggggaacaatgagtgtcct
acttgcagaaaacattgtgcaagccgacgttctttaagagacgacccaaactttgatgcc
ttaatagcagctttattcaaaaatattgataaatttgaggaggaggaattgaattttcgt
caagatgatgaagctcgtaataagcagattcaagcatctatagctcaagtatcgcaacga
caatctaaggcccttgtaaaaagaaagtctgttggtaaaggcacagcgatcttatcgaga
tcacgacgtagtggtggcggctccagaagaagaaggaactgcagaaacattgaacaggat
acatcagaagccaatgatgatgatgatcaaaacaaaagaggcaaagattcttcttcagat
gagccttgtgagaggcaacgaaaaaagcgttcagcaactcagccttcttcttcaaatgca
aacaacaacgataactgcgcaggtaatggcacagagcagacgcatcagagggacagcaga
gtaatatcacctgtgcttgtgtggaactcggaactaattgcatggggaagaggcggtaca
aggagtaacacaaggcaaggaaataataaccaaggagctattagtaagagaaatgctcgc
ttgaaaagacttgtggaatatctcgggagcttagagggtaatagtgtcgagttggatatt
catcttaagcttgtctcgctggatacagaaggtttactaaacttacatgagccatatctt
tgtttccggcccactttgctagttaaacaactccgcgaatatgtggcacgccatttaaaa
ttgaaggctgaagaggttgaattgttggtgtctaaagatggggatacggtcattgggaat
aagacctcaacagagaagatgcaaagcctgcaagatgatgagaccgtggcaaagctaaaa
gttgattgcatttcgagcaatggatatatgattgtagtgtaccggagaaagcaaatcgcg
tag

  All links  
Gene (30)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (9)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (12)   
   Pfam (12)   
All databases (57)   

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