KEGG   Arabidopsis thaliana (thale cress): AT1G09900
Entry
AT1G09900         CDS       T00041                                 
Name
(RefSeq) Pentatricopeptide repeat (PPR-like) superfamily protein
Organism
ath  Arabidopsis thaliana (thale cress)
SSDB
Motif
Pfam: PPR_2 PPR_1 PPR PPR_3 PPR_long MRP-S27 Cytomega_UL20A
Other DBs
NCBI-GeneID: 837522
NCBI-ProteinID: NP_172461
TAIR: AT1G09900
UniProt: Q3EDF8 A0A5S9TLE0
Position
1:3218133..3219929
AA seq 598 aa
MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCRTSGSISSKIPLGSRKRNRLVLVSAA
SKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEE
GFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMIS
GYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI
TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM
PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL
GRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTM
LTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL
KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAID
FLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQVAGKM
NT seq 1797 nt   +upstreamnt  +downstreamnt
atggatttgatggtgtccacaagcagtgctcaagaagggttttgcttgattcaacaattt
catcgcgaatataaacgaggtaataagcttgacgtctcatgtcgtacttctggtagtatt
agttctaaaatccctcttgggtcacgaaaaaggaatcgacttgttctggtttctgcggct
tctaaggttgagagttcaggtcttaatggtagagctcaaaagttcgaaactttgtcctct
gggtatagcaatagtaacggaaatggtcattatagctctgtgaattcgtcttttgcgttg
gaagatgtcgagagtaataaccatttgcgtcagatggttagaaccggtgaattggaggaa
gggtttaagtttctagagaacatggtttatcacggtaatgttcctgatatcattccgtgc
acgacattgattcgcggattctgtaggttgggtaagacgaggaaagctgcaaagatcttg
gagattcttgaaggctctggtgctgttcctgatgttataacttacaatgttatgattagt
gggtattgcaaagctggggagatcaataacgcgttatctgttcttgatagaatgagtgtt
tcgccggatgttgtcacttataataccatcttgcgttctctttgcgatagtgggaaactt
aagcaagccatggaggttcttgataggatgcttcagagagactgttatccagatgtgatt
acttacactatattgattgaagctacttgcagagatagtggtgtgggacatgcgatgaag
cttctcgatgaaatgagggatagaggatgtactcctgatgttgtgacttacaacgttctt
gtgaatggtatttgtaaagaggggagattggatgaggccattaagtttttgaatgacatg
ccgtcttctggatgtcaaccaaatgttattacacataacataattctgcggagtatgtgt
agtactgggagatggatggatgcagagaagcttcttgctgatatgcttcgtaaaggcttt
tcgccaagcgttgtcactttcaatatcttgattaatttcttgtgtagaaaaggtttgctt
ggccgagcgattgacatattggagaagatgcctcaacatggatgtcagccgaattctttg
agttacaacccgctgcttcacgggttttgcaaggagaaaaagatggatagggctatcgag
tatttggagagaatggtttctcgtggttgttatccagacattgtcacctacaacactatg
ctaacagctttgtgcaaagatgggaaagttgaagatgcggttgagatacttaatcaactt
agtagcaagggatgttctcctgttctaatcacttataatactgtcattgatgggcttgca
aaagctggtaaaactggcaaagcgataaaactgctagatgagatgcgtgcgaaagattta
aagcctgacactatcacctattcctctcttgttggaggtttaagcagggaaggaaaagta
gacgaagccattaagtttttccatgagtttgagcggatgggcattaggccaaatgcagtc
acctttaattctatcatgcttggactctgtaagagtcggcaaacagatcgtgccatcgat
ttcttggtttttatgatcaacagagggtgtaaaccgaatgaaacatcatacacgattctg
atagaaggcttagcttatgaaggtatggcaaaggaagctttggagctgcttaatgagctt
tgtaacaagggactcatgaagaaaagctctgctgagcaagttgcagggaagatgtag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (28)   

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