KEGG   Arabidopsis thaliana (thale cress): AT1G11720
Entry
AT1G11720         CDS       T00041                                 
Symbol
SS3
Name
(RefSeq) starch synthase 3
  KO
K00703  starch synthase [EC:2.4.1.21]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00500  Starch and sucrose metabolism
ath01100  Metabolic pathways
ath01110  Biosynthesis of secondary metabolites
Module
ath_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00500 Starch and sucrose metabolism
    AT1G11720 (SS3)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:ath01003]
    AT1G11720 (SS3)
Enzymes [BR:ath01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.21  starch synthase (glycosyl-transferring)
     AT1G11720 (SS3)
Glycosyltransferases [BR:ath01003]
 Polysaccharide
  Storage polysaccharide
   AT1G11720 (SS3)
SSDB
Motif
Pfam: Glyco_transf_5 CBM53 Glyco_transf_4 Glyco_trans_1_4 Glycos_transf_1 Glyco_trans_4_4
Other DBs
NCBI-GeneID: 837716
NCBI-ProteinID: NP_172637
TAIR: AT1G11720
UniProt: F4IAG2
Position
1:3951366..3957044
AA seq 1042 aa
MISYFLNQDFSRKKQGRMAASGPKSSGPRGFGRRTTVGSAQKRTQKKNGEKDSNATSTAT
NEVSGISKLPAAKVDVQKQSSVVLNERNVLDRSDIEDGSDRLDKKTTDDDDLLEQKLKLE
RENLRRKEIETLAAENLARGDRMFVYPVIVKPDEDIEVFLNRNLSTLNNEPDVLIMGAFN
EWRWKSFTRRLEKTWIHEDWLSCLLHIPKEAYKMDFVFFNGQSVYDNNDSKDFCVEIKGG
MDKVDFENFLLEEKLREQEKLAKEEAERERQKEEKRRIEAQKAAIEADRAQAKAETQKRR
ELLQPAIKKAVVSAENVWYIEPSDFKAEDTVKLYYNKRSGPLTNSKELWLHGGFNNWVDG
LSIVVKLVNAELKDVDPKSGNWWFAEVVVPGGALVIDWVFADGPPKGAFLYDNNGYQDFH
ALVPQKLPEELYWLEEENMIFRKLQEDRRLKEEVMRAKMEKTARLKAETKERTLKKFLLS
QKDVVYTEPLEIQAGNPVTVLYNPANTVLNGKPEVWFRGSFNRWTHRLGPLPPQKMEATD
DESSHVKTTAKVPLDAYMMDFVFSEKEDGGIFDNKNGLDYHLPVVGGISKEPPLHIVHIA
VEMAPIAKVGGLGDVVTSLSRAVQELNHNVDIVFPKYDCIKHNFVKDLQFNRSYHWGGTE
IKVWHGKVEGLSVYFLDPQNGLFQRGCVYGCADDAGRFGFFCHAALEFLLQGGFHPDILH
CHDWSSAPVSWLFKDHYTQYGLIKTRIVFTIHNLEFGANAIGKAMTFADKATTVSPTYAK
EVAGNSVISAHLYKFHGIINGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEELQNRLG
LKSADFPVVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQL
HSSHGDRARLVLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLIAMRYGAVPVVRKTGGL
FDTVFDVDHDKERAQAQVLEPNGFSFDGADAPGVDYALNRAISAWYDGREWFNSLCKTVM
EQDWSWNRPALEYLELYHSARK
NT seq 3129 nt   +upstreamnt  +downstreamnt
atgatttcttattttcttaaccaagacttttcaaggaagaagcaaggaagaatggctgct
tcaggaccaaaaagctcaggtcccagaggttttgggcgacgaacaacagtaggaagtgct
cagaaaagaactcagaagaagaatggtgaaaaagatagtaatgccacttctacagcaaca
aacgaggtttcagggattagtaagttgcccgcagctaaagtggatgtacagaagcaaagc
tctgttgttttgaatgagagaaatgtgttagataggtcggatattgaggatggaagtgat
cgtttggacaagaaaacaaccgatgatgatgatttgttagaacaaaagttaaaacttgaa
agagagaatcttcgtaggaaggaaatagaaacgcttgcagcggaaaatttggcgagaggt
gatagaatgtttgtgtatcccgttattgtgaaacctgatgaagacatagaagtgtttctc
aacaggaatctgtcgactctgaataacgaacccgatgttttgatcatgggggcgtttaac
gaatggagatggaagtctttcacaaggagattggaaaagacctggatccatgaagattgg
ttgtcatgtctccttcatatccccaaagaagcgtataagatggacttcgtgtttttcaat
gggcaaagtgtatatgacaacaatgactcaaaagatttttgtgtagagataaaaggtggg
atggataaagttgactttgagaattttcttctagaagagaaactgcgagagcaagagaag
ttagccaaggaagaagctgagagggagaggcaaaaagaagagaagagaagaatcgaagct
caaaaggctgcaattgaagctgatagagcacaagcaaaggcggagactcagaagagacgt
gaattgcttcaaccggctattaagaaagctgtagtctcggctgagaatgtttggtacatt
gagccgagtgatttcaaggctgaagatacagtgaagctatattacaataaaaggtcaggt
cctctgactaattccaaagaactgtggttacatggagggtttaataattgggttgatgga
ttatctatcgttgtaaagcttgttaatgctgagttaaaggatgttgatccaaagagcgga
aattggtggttcgctgaagttgtagtgcctggcggtgcactagtcattgactgggtcttt
gctgatggaccacctaaaggagcgtttctgtatgacaataatggttaccaagacttccac
gcacttgttcctcaaaaacttcctgaagaactttactggttagaggaagaaaatatgatt
tttagaaaacttcaggaggataggcggttaaaagaggaagttatgcgtgccaagatggaa
aaaacagctcgcttgaaagctgaaactaaggaaagaacactgaaaaagtttctgctatcc
cagaaagacgtggtttacaccgagcctctagagattcaagcaggaaaccctgtgactgta
ttgtacaatcctgcaaacacggttttgaatggaaaacctgaagtttggtttagaggctct
tttaatcgttggactcaccgcttgggccctttgccacctcagaaaatggaagcaacagat
gatgaaagctcacatgtgaagactacggctaaggtcccattggatgcttacatgatggac
tttgtgttctctgagaaagaggatggcggaatatttgataacaaaaatggtctggattac
catttaccagtcgtgggaggtatttcaaaggaaccaccattgcacattgttcatattgct
gttgaaatggcacccatcgcaaaggttggtggcctaggtgatgttgtcactagtctatct
cgcgctgttcaagaattaaaccataatgtggatatagtttttccaaagtatgattgcata
aagcacaattttgtgaaggacttgcaatttaacagaagctatcactggggaggaactgaa
ataaaagtttggcatggaaaagtagaaggcctttcggtttacttcttagatccacaaaat
ggattgtttcagcgaggatgtgtttacggttgtgcagatgatgcaggaagattcggtttc
ttctgtcatgcggctcttgaatttcttctccaaggaggtttccatccagacattcttcac
tgtcatgactggtctagtgctccggtttcatggttattcaaggatcattacacacagtac
ggtttaattaaaacccgtattgtcttcacaattcataatttggaatttggagcgaatgcc
attggtaaagcaatgacatttgcagacaaagccacaacggtttcaccaacttatgctaag
gaagttgctggaaactctgtaatctctgcacatttatacaaatttcacggaattataaac
gggattgacccagatatatgggatccatataacgataactttattcccgtaccttatact
tcagagaacgttgtagaaggcaaaagagcagccaaggaagaattgcaaaacaggcttgga
ctaaagagtgccgattttccagtagtaggaattattacgcgcttaacacaccagaaggga
atacatttgatcaagcacgctatttggcgtaccttggaacggaatggacaggttgtctta
ttaggttcagctccagatcctcggatccaaaatgattttgtaaacttggcaaaccaatta
cattcttctcatggtgaccgggctcggcttgttctaacctacgatgaacctctttcccat
ttgatttatgctggggctgactttattcttgtaccgtcgatatttgagccatgtggactg
acacagctcatagccatgagatacggcgctgttcctgttgttagaaaaactggaggactc
tttgatacggtttttgatgttgaccacgataaagaaagggcacaagctcaagttctagaa
cctaatggtttcagcttcgacggagctgatgctcctggtgttgattatgctctcaatagg
gcgatatcggcgtggtacgatggtagagagtggtttaactcgctgtgcaagacggtgatg
gagcaagactggtcatggaaccgtcctgcacttgagtatcttgagctctatcactctgca
cgcaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (3)   
   KEGG MODULE (2)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (49)   

Download RDF
DBGET integrated database retrieval system