KEGG   Arabidopsis thaliana (thale cress): AT1G13160
Entry
AT1G13160         CDS       T00041                                 
Name
(RefSeq) ARM repeat superfamily protein
  KO
K14856  protein SDA1
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ath03009]
    AT1G13160
Ribosome biogenesis [BR:ath03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    AT1G13160
SSDB
Motif
Pfam: SDA1_HEAT SDA1_C
Other DBs
NCBI-GeneID: 837874
NCBI-ProteinID: NP_172775
TAIR: AT1G13160
UniProt: Q0WVH7 A0A178WBI5
Position
1:4484584..4488577
AA seq 804 aa
MSGSLGLTPASLKASGRSSENVSLLTLQGKIKRDPEGYETELQLIYKQFKTSVDLFHELA
ALSFSSTGGIGSDPSVSKDLGDRAMFLAHVTPFYPKQLAAFPAQLTGLLRTSCLAMPSGL
RNHIAQALILLMNRKSLVIEDLLALFLDIQTLGDKNLRNLAFGHIVQTIRKMSITDPKHK
SLQKIVISMLEQEDEAKAKRALATLCALHKKKIWLGDKNERVAIAICEACFHSSPRIMIS
ALRFLLDYENIDDDDDSDAESDDDEESKKIDQVVINRQAVYKANNKGTSSSKKKKQAKLQ
RAVKSIKRKQRSSSENTTSTFSPLNHLNDAQKFAEKLFSRLQTIKGSGERVETRLMMIKV
IARTIGLHKLHLLSFYPFLQNYALPHVKDITQILAAAVQSCHDGVPSDVVEPLFKQIVNQ
FVHDKSRPEAIAVGLNVVREMCLRVHDLMTEELLQDLALYKKSHEKAISAAARSLIALFR
EINPSLLVKKDRGRPGATVFIPKHYGESNVFSNVPNVELLQESDNESGSDGDQDDDGVEL
PIGDDVEQELIPGDCGSEDKAEEDSNDGDDMNNTEDDSDIDTSIGGDEDEEVNDSDEADT
DSENEEIESEEEDGEASDSSVEDSGNKEKAKGKKRKIVDFDANLLSADTSLRALKRFAEA
KNEKPSFDEGDGILSNEDFRKIKTLQAKKEAKIALARKGFKVPNSDQLSKKRVDPAKLEA
HIRHKLTKEQRLELVKAGREDRGKYKSKAAVKQKKTGGSSNKQKEHRKNMPLAAIRSKAG
KSKRIKKMKNSISGSQFRGRKAWK
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgtccggcagtctaggtttaacgccggcatccttaaaggcatctggccggagctccgag
aatgtcagtcttcttacccttcaaggtaaaatcaaacgtgacccagaaggttacgaaaca
gagctccaattgatttacaaacagttcaaaacctccgtcgatctcttccatgaactagca
gctctcagtttctcctccactggtggcattggctctgacccttctgtttcgaaagacctc
ggcgaccgtgccatgtttctagctcacgttactcccttttacccgaagcaactcgcggcg
tttccagctcaattaactggtttactccgtacttcgtgcttagctatgccctcggggctt
cgaaaccatattgcacaagctctgatccttctaatgaatcgaaagagtcttgtcatcgag
gatttgctggctttgtttctggatattcagactcttggtgacaaaaacctgcgaaatctt
gcttttggtcacattgttcaaaccattcgtaagatgagtatcaccgatcccaagcacaaa
tcacttcagaagattgtaatctctatgttggagcaagaagatgaagcaaaggctaagaga
gcacttgctactctctgtgcgctacacaagaaaaagatctggcttggtgataaaaatgaa
agagttgcaattgcgatttgtgaagcctgctttcattcttcacctaggattatgatttcc
gctcttcggtttcttcttgattatgagaacatagacgatgatgacgatagtgatgctgaa
agcgatgatgacgaggagtcaaagaaaatagatcaggttgtgattaatcgacaggctgtt
tacaaggcaaacaacaaaggtacatcctctagcaagaagaaaaagcaagcaaaacttcag
cgtgcagtgaaaagtattaaaagaaagcagcgttcgtcgtctgagaacaccacttcaaca
ttttcacctcttaatcatttaaatgatgcgcagaaattcgcagagaaattgttttcccgt
cttcagaccatcaagggcagtggtgaacgtgttgagactaggttgatgatgattaaagtt
attgctcgcacaattggtcttcacaagttgcatttactaagtttctatccttttcttcaa
aactatgctctgccgcatgtaaaggacattacacaaatacttgcagcagcagttcaatct
tgccacgatggggttccttctgatgttgtggagccactgttcaagcaaattgtgaatcag
tttgtacacgacaagtcacgtcctgaggctattgctgtcggactcaatgtggtgcgagaa
atgtgcctgagggttcacgacttgatgacagaagagttactgcaagatcttgctctgtat
aaaaagtcccatgaaaaagccatctcagcagcagcacgttccctcatagcattgttcaga
gagatcaacccttcgcttctggttaaaaaagatcgtggccgtcctggagctaccgtcttc
atacctaaacattatggagagtctaatgtcttcagcaatgttcctaatgttgaattattg
caagaaagtgataatgagagtggctctgatggtgatcaagacgatgatggcgtggagttg
cctatcggcgatgatgttgagcaggagctgatacctggtgattgtggaagcgaggacaaa
gctgaagaagattccaatgatggtgatgatatgaataacactgaagacgatagtgatata
gatacttcaataggtggtgatgaagatgaagaggtgaatgacagtgatgaagctgataca
gattcggaaaatgaggaaatcgaaagcgaagaagaggatggagaagcttctgattcttct
gtagaggatagtggaaacaaagagaaagctaagggcaagaagaggaagattgtagatttt
gatgcgaatcttctctctgctgatacaagcctccgagcactcaagagattcgcagaagca
aagaacgaaaagccttcttttgatgaaggtgatggcatactttcgaatgaggacttccga
aaaatcaaaacacttcaggcaaagaaggaagcaaaaattgcattggctcgaaaaggattc
aaggttccgaattctgatcagctaagcaagaagcgggtcgatccagccaaacttgaagct
cacataaggcataaactaacaaaggaacaaagactggaattagttaaagcgggtagggag
gacagagggaaatacaaatccaaggctgccgtcaaacagaagaagactggaggatcaagc
aataaacagaaggagcacaggaagaatatgcctcttgctgcaataagatcaaaggctggt
aaatcaaaacgaattaagaagatgaagaatagcatcagcggaagccagtttagaggaagg
aaagcttggaagtga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (45)   

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